RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	ZSCAN5A	Q9BUG6	496 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	SLC6A15	Q9H2J7	730 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	FAM83D	Q9H4H8	585 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	ANKZF1	Q9H8Y5	726 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	LZTFL1	Q9NQ48	299 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	G6PC2	Q9NQR9	355 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	RAD18	Q9NS91	495 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	ABHD10	Q9NUJ1	306 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	RMND1	Q9NWS8	449 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	DTL	Q9NZJ0	730 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	AIPL1	Q9NZN9	384 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	KCMF1	Q9P0J7	381 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	CLCF1	Q9UBD9	225 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	ASH2L	Q9UBL3	628 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	MAPRE3	Q9UPY8	281 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	RNF114	Q9Y508	228 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	FKBP7	Q9Y680	259 aa		4.43	□□□□□ -1.7
MSI2-216	ENST00000582772	DNAH17	Q9UFH2	4485 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	TRAV20	A0A0B4J274	112 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772		A0A0J9YYE9	177 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	SHISA9	B4DS77	424 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	GPR37	O15354	613 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	EXOC3	O60645	756 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	SRPX2	O60687	465 aa	Predicted RBP	4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	LY6H	O94772	140 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	TRBC1	P01850	177 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	FUT4	P22083	530 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	TXLNA	P40222	546 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	BPIFB4	P59827	614 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	KCNJ2	P63252	427 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	UBXN1	Q04323	297 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	GABPB1	Q06547	395 aa	Predicted RBP	4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	ENPEP	Q07075	957 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	CDK5R2	Q13319	367 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	NFE2L1	Q14494	772 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	RFTN1	Q14699	578 aa	Predicted RBP	4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	NRN1L	Q496H8	165 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	CCDC14	Q49A88	953 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	KHDC1	Q4VXA5	237 aa	Known RBP	4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	COBLL1	Q53SF7	1204 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	ANKRD34A	Q69YU3	496 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	FAM214B	Q7L5A3	538 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	RNF144B	Q7Z419	303 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	KIAA1328	Q86T90	577 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	TRAPPC5	Q8IUR0	188 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	CNGA4	Q8IV77	575 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	RCOR2	Q8IZ40	523 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	GCNT2	Q8N0V5	402 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	GOLM1	Q8NBJ4	401 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	OR52E1	Q8NGJ3	308 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	EID2B	Q96D98	161 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	CCDC34	Q96HJ3	373 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	RMDN2	Q96LZ7	410 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	LRRC37B	Q96QE4	947 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	PSKH2	Q96QS6	385 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	CITED4	Q96RK1	184 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	DNAJC7	Q99615	494 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	SELENOO	Q9BVL4	669 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	NUP85	Q9BW27	656 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	PARD6B	Q9BYG5	372 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	GTPBP4	Q9BZE4	634 aa	Known RBP	4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	WWP1	Q9H0M0	922 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	MAGEF1	Q9HAY2	307 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	ARFGAP3	Q9NP61	516 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	RYDEN	Q9NUL5	291 aa	Known RBP	4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	TUBA8	Q9NY65	449 aa	Predicted RBP	4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	ZDHHC2	Q9UIJ5	367 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	CORIN	Q9Y5Q5	1042 aa		4.42	□□□□□ -1.7
MSI2-216	ENST00000582772	C15orf38-AP3S2	A0A0A6YYH1	394 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	GOLGA8Q	A0A0J9YX86	632 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	GOLGA8O	A6NCC3	632 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	GOLGA8N	F8WBI6	632 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772		H3BQF6	201 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	GOLGA8R	I6L899	631 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772		J3QLI3	93 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	RGS14	O43566	566 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	FZD6	O60353	706 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	ERLIN1	O75477	346 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	SMNDC1	O75940	238 aa	Known RBP eCLIP	4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	MT-CYB	P00156	380 aa	Predicted RBP	4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	LHB	P01229	141 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	SLC35G4	P0C7Q5	338 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	MAG	P20916	626 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	MMP8	P22894	467 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	EEF1G	P26641	437 aa	Known RBP	4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	FOXN2	P32314	431 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	PTPN9	P43378	593 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	RPL21	P46778	160 aa	Known RBP	4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	SSR4	P51571	173 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	MCCD1	P59942	119 aa	Predicted RBP	4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	RPL15	P61313	204 aa	Known RBP	4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	EGFEM1P	Q0D2K5	195 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	TRAF2	Q12933	501 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	PTK6	Q13882	451 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	KIR2DS3	Q14952	304 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	TERF2	Q15554	542 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	SYTL3	Q4VX76	610 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	SFT2D3	Q587I9	215 aa		4.41	□□□□□ -1.7
MSI2-216	ENST00000582772	RALGPS1	Q5JS13	557 aa		4.41	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms