RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 RNASE8Q8TDE3 154 aaKnown RBP4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 EPSTI1Q96J88 318 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 ACAT2Q9BWD1 397 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 HOXD1Q9GZZ0 328 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 NAPBQ9H115 298 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 DBF4Q9UBU7 674 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 NPIPB9F8W1W9 429 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 ECE2O60344 883 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 SKILP12757 684 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 P4HA1P13674 534 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 PRKACGP22612 351 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 CLCN4P51793 760 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 UCP2P55851 309 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 CNTN1Q12860 1018 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 CEACAM7Q14002 265 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 FAM189A2Q15884 450 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 SPANXN4Q5MJ08 99 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 PRSS42Q7Z5A4 293 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 OR13C5Q8NGS8 318 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 ZNF519Q8TB69 540 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 CD99L2Q8TCZ2 262 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 GGHQ92820 318 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 SLCO2A1Q92959 643 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 SLC35C1Q96A29 364 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 C5orf30Q96GV9 206 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 ZNF300Q96RE9 604 aaPredicted RBP4□□□□□ -1.77
SMCHD1-205ENST00000581383 USP28Q96RU2 1077 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 PCDHB18PQ96TA0 734 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 UBAC1Q9BSL1 405 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 PNPLA3Q9NST1 481 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 DNAJC11Q9NVH1 559 aa4□□□□□ -1.77
SMCHD1-205ENST00000581383 EXOGQ9Y2C4 368 aaKnown RBP4□□□□□ -1.77
SMCHD1-205ENST00000581383 hCG_38984A0A1B0GV85 526 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 NKX6-3A6NJ46 265 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 CLN5O75503 358 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 CEACAM4O75871 244 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 BAG2O95816 211 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 GAS8O95995 478 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 PNPP00491 289 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 CALCAP01258 141 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 ZNF883P0CG24 379 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 ODC1P11926 461 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 EZRP15311 586 aaKnown RBP3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 HLA-DPA1P20036 260 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 FEN1P39748 380 aaKnown RBP3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 DHODHQ02127 395 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 SLC1A5Q15758 541 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 BSPRYQ5W0U4 402 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 RFPL4BQ6ZWI9 263 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 SERPINA12Q8IW75 414 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 CNTN4Q8IWV2 1026 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 SLC22A15Q8IZD6 547 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 SLC43A2Q8N370 569 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 SPEM1Q8N4L4 309 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 ZNF614Q8N883 585 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 RNF149Q8NC42 400 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 PSMA8Q8TAA3 256 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 SMPDL3AQ92484 453 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 ULK4Q96C45 1275 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 CNRIP1Q96F85 164 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 ZNF274Q96GC6 653 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 KRT12Q99456 494 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 ASCL2Q99929 193 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 MTHFD2LQ9H903 347 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 MAGEF1Q9HAY2 307 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 B3GAT2Q9NPZ5 323 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 BARHL2Q9NY43 387 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 BAIAP2L1Q9UHR4 511 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 PSORS1C1Q9UIG5 152 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 LNPEPQ9UIQ6 1025 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 ETV7Q9Y603 341 aa3.99□□□□□ -1.77
SMCHD1-205ENST00000581383 RNF123Q5XPI4 1314 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 NOTCH3Q9UM47 2321 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 A0A1B0GU03 582 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 TMEM129A0AVI4 362 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 LMO7DNF2Z398 122 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 DDX39AO00148 427 aaKnown RBP3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 CHUKO15111 745 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 SIGLEC5O15389 551 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 SYT7O43581 403 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 TLX2O43763 284 aaPredicted RBP3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 RPLP0P05388 317 aaKnown RBP3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 ZSCAN5DPP0CG00 497 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 C4BPBP20851 252 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 GIFP27352 417 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 IRX4P78413 519 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 CYCSP99999 105 aaKnown RBP3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 LCP2Q13094 533 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 GPR50Q13585 617 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 STXBP2Q15833 593 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 HFEQ30201 348 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 LYPLAL1Q5VWZ2 237 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 ZNF776Q68DI1 518 aaPredicted RBP3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 TMEM64Q6YI46 380 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 Q6ZVQ6 151 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 Q71RC1 249 aaPredicted RBP3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 ZER1Q7Z7L7 766 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 NUP37Q8NFH4 326 aa3.98□□□□□ -1.77
SMCHD1-205ENST00000581383 RPLP0P6Q8NHW5 317 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms