RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SLC26A1Q9H2B4 701 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 OR51B5Q9H339 312 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 DDX31Q9H8H2 851 aaKnown RBP9.87□□□□□ -0.83
CCDC47-203ENST00000580986 ANKHQ9HCJ1 492 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 PRDM7Q9NQW5 492 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 IRAK4Q9NWZ3 460 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 KLK13Q9UKR3 277 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 SLC12A4Q9UP95 1085 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 WBP11Q9Y2W2 641 aaKnown RBP9.87□□□□□ -0.83
CCDC47-203ENST00000580986 MAP4K5Q9Y4K4 846 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 BLACEA4D250 179 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 SYNDIG1LA6NDD5 238 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 STMND1H3BQB6 276 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 MEN1O00255 615 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 LSM1O15116 133 aaKnown RBP9.86□□□□□ -0.83
CCDC47-203ENST00000580986 STK17BO94768 372 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 KIAA0754O94854 1291 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 MED26O95402 600 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 SERPIND1P05546 499 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 KLK3P07288 261 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-203ENST00000580986 ZNF888P0CJ79 500 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-203ENST00000580986 HIST1H1TP22492 207 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-203ENST00000580986 SERPINB3P29508 390 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 LSP1P33241 339 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 BSGP35613 385 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 RAP1GDS1P52306 607 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 TRA2BP62995 288 aaKnown RBP9.86□□□□□ -0.83
CCDC47-203ENST00000580986 DCDP81605 110 aaKnown RBP9.86□□□□□ -0.83
CCDC47-203ENST00000580986 PRR20EP86478 221 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 PRR20CP86479 221 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 PRR20DP86480 221 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 PRR20BP86481 221 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 PRR20AP86496 221 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 MAD2L1Q13257 205 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-203ENST00000580986 KIAA0040Q15053 153 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 AP5B1Q2VPB7 878 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 OR4C11Q6IEV9 310 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 MRM1Q6IN84 353 aaKnown RBP9.86□□□□□ -0.83
CCDC47-203ENST00000580986 TTLL10Q6ZVT0 673 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 UBE3DQ7Z6J8 389 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 ZFAND4Q86XD8 727 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 DTX1Q86Y01 620 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 ESX1Q8N693 406 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 SLC38A9Q8NBW4 561 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 C7orf57Q8NEG2 295 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 AGR3Q8TD06 166 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 CHMP6Q96FZ7 201 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 OR1F2PQ96R84 312 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 F2RL3Q96RI0 385 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 CTRCQ99895 268 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 SLC7A5P2Q9GIP4 190 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 TGIF2Q9GZN2 237 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 KLHL31Q9H511 634 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 COPS7BQ9H9Q2 264 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-203ENST00000580986 LYRM4Q9HD34 91 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 LHX9Q9NQ69 397 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 PNPOQ9NVS9 261 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 C1orf109Q9NX04 203 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 MS4A12Q9NXJ0 267 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 ASIC5Q9NY37 505 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 MCM8Q9UJA3 840 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 USH1CQ9Y6N9 552 aa9.86□□□□□ -0.83
CCDC47-203ENST00000580986 A0A0A6YYD5 115 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 PMS2P1A4D2B8 440 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 TRABD2BA6NFA1 517 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 C4orf51C9J302 202 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 B3GALT2O43825 422 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 SHOX2O60902 331 aaPredicted RBP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 GUCY1B2O75343 617 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 SKAP2O75563 359 aaPredicted RBP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 KLHL18O94889 574 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 JUNP05412 331 aaKnown RBP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 LINC00032P0C843 101 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 TROVE2P10155 538 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 AGXTP21549 392 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 ATP5A1P25705 553 aaKnown RBP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 SLC5A2P31639 672 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 SSR2P43308 183 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 PLA2G16P53816 162 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 HMGCS1Q01581 520 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 ACSM2AQ08AH3 577 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 NR6A1Q15406 480 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 PDCD2Q16342 344 aaPredicted RBP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 TBC1D25Q3MII6 688 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 NKAIN1Q4KMZ8 207 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 DEFB134Q4QY38 66 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 ATP6AP1LQ52LC2 224 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 SGO1Q5FBB7 561 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 ACSM2BQ68CK6 577 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 FAM47EQ6ZV65 393 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 LARP4Q71RC2 724 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCDC47-203ENST00000580986 COMMD6Q7Z4G1 85 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 PDSS2Q86YH6 399 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 DDIASQ8IXT1 998 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 FAM9CQ8IZT9 166 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 RNF175Q8N4F7 328 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 AMER3Q8N944 861 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 ACOT4Q8N9L9 421 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 OR2T11Q8NH01 316 aa9.85□□□□□ -0.83
CCDC47-203ENST00000580986 ACTRT2Q8TDY3 377 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms