RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 SRFBP1Q8NEF9 429 aaKnown RBP11.53□□□□□ -0.56
CCDC84-209ENST00000580556 TWIST2Q8WVJ9 160 aa11.53□□□□□ -0.56
CCDC84-209ENST00000580556 GAL3ST3Q96A11 431 aa11.53□□□□□ -0.56
CCDC84-209ENST00000580556 METTL2AQ96IZ6 378 aaKnown RBP11.53□□□□□ -0.56
CCDC84-209ENST00000580556 MTERF1Q99551 399 aaKnown RBP11.53□□□□□ -0.56
CCDC84-209ENST00000580556 SERPINI1Q99574 410 aa11.53□□□□□ -0.56
CCDC84-209ENST00000580556 CENPKQ9BS16 269 aa11.53□□□□□ -0.56
CCDC84-209ENST00000580556 SHCBP1LQ9BZQ2 653 aa11.53□□□□□ -0.56
CCDC84-209ENST00000580556 ZNF395Q9H8N7 513 aaPredicted RBP11.53□□□□□ -0.56
CCDC84-209ENST00000580556 APMAPQ9HDC9 416 aa11.53□□□□□ -0.56
CCDC84-209ENST00000580556 PFDN4Q9NQP4 134 aa11.53□□□□□ -0.56
CCDC84-209ENST00000580556 ZNF71Q9NQZ8 489 aaPredicted RBP11.53□□□□□ -0.56
CCDC84-209ENST00000580556 NMRK1Q9NWW6 199 aa11.53□□□□□ -0.56
CCDC84-209ENST00000580556 RUVBL1Q9Y265 456 aaKnown RBP11.53□□□□□ -0.56
CCDC84-209ENST00000580556 TIMM22Q9Y584 194 aa11.53□□□□□ -0.56
CCDC84-209ENST00000580556 DNAJC15Q9Y5T4 150 aa11.53□□□□□ -0.56
CCDC84-209ENST00000580556 HYKKA2RU49 373 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 MAGEB17A8MXT2 336 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 TMEM233B4DJY2 109 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 CPNE3O75131 537 aaKnown RBP11.52□□□□□ -0.57
CCDC84-209ENST00000580556 SCRG1O75711 98 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 PDYNP01213 254 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 EIF2S1P05198 315 aaKnown RBP11.52□□□□□ -0.57
CCDC84-209ENST00000580556 CTSBP07858 339 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 CD82P27701 267 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 HNRNPH1P31943 449 aaKnown RBP11.52□□□□□ -0.57
CCDC84-209ENST00000580556 CASRP41180 1078 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 POLE2P56282 527 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 TGM3Q08188 693 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 KCNAB2Q13303 367 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 ABRAXAS2Q15018 415 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 HERC3Q15034 1050 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 TCHHL1Q5QJ38 904 aaPredicted RBP11.52□□□□□ -0.57
CCDC84-209ENST00000580556 DEPDC1Q5TB30 811 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 KHDRBS2Q5VWX1 349 aaKnown RBP11.52□□□□□ -0.57
CCDC84-209ENST00000580556 RHBDD2Q6NTF9 364 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 PWWP2BQ6NUJ5 590 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 CHSY3Q70JA7 882 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 TMEM126BQ8IUX1 230 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 OR2L5Q8NG80 312 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 PIWIL2Q8TC59 973 aaKnown RBP11.52□□□□□ -0.57
CCDC84-209ENST00000580556 PROKR1Q8TCW9 393 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 MS4A6EQ96DS6 147 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 C10orf90Q96M02 699 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 LRFN5Q96NI6 719 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 NDC1Q9BTX1 674 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 REXO4Q9GZR2 422 aaKnown RBP11.52□□□□□ -0.57
CCDC84-209ENST00000580556 SPRTNQ9H040 489 aaPredicted RBP11.52□□□□□ -0.57
CCDC84-209ENST00000580556 ACTR5Q9H9F9 607 aaPredicted RBP11.52□□□□□ -0.57
CCDC84-209ENST00000580556 IRAK4Q9NWZ3 460 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 VTI1BQ9UEU0 232 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 SDK2Q58EX2 2172 aa11.52□□□□□ -0.57
CCDC84-209ENST00000580556 A0A088AWK7 358 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 A0A1B0GX78 115 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 TCP11X1B4DZS4 312 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 SLC28A1O00337 649 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 DSCR3O14972 297 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 ZNF749O43361 778 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 RSL1D1O76021 490 aaKnown RBP11.51□□□□□ -0.57
CCDC84-209ENST00000580556 SCELO95171 688 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 SERPIND1P05546 499 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 SMIM10L1P0DMW3 83 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 ALOX12P18054 663 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 ZNF10P21506 573 aaPredicted RBP11.51□□□□□ -0.57
CCDC84-209ENST00000580556 PRPH2P23942 346 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 HTR6P50406 440 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 NEK2P51955 445 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 RPS13P62277 151 aaKnown RBP11.51□□□□□ -0.57
CCDC84-209ENST00000580556 DDX39BQ13838 428 aaKnown RBP11.51□□□□□ -0.57
CCDC84-209ENST00000580556 MAP7Q14244 749 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 TUBB8Q3ZCM7 444 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 XKR7Q5GH72 579 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 PRMT9Q6P2P2 845 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 TRIM40Q6P9F5 258 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 BORAQ6PGQ7 559 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 LRRC34Q8IZ02 419 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 KCT2Q8NC54 265 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 AGR3Q8TD06 166 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 UTP15Q8TED0 518 aaKnown RBP11.51□□□□□ -0.57
CCDC84-209ENST00000580556 STON2Q8WXE9 905 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 CCT6BQ92526 530 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 PMEPA1Q969W9 287 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 SMIM10Q96HG1 83 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 KCNC2Q96PR1 638 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 DPH2Q9BQC3 489 aaPredicted RBP11.51□□□□□ -0.57
CCDC84-209ENST00000580556 SIKE1Q9BRV8 207 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 ACPTQ9BZG2 426 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 SPRY4Q9C004 299 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 ROGDIQ9GZN7 287 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 AICDAQ9GZX7 198 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 ADNPQ9H2P0 1102 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 TUBB1Q9H4B7 451 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 CLK4Q9HAZ1 481 aaKnown RBP11.51□□□□□ -0.57
CCDC84-209ENST00000580556 SLCO1B3Q9NPD5 702 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 FARSBQ9NSD9 589 aaKnown RBP11.51□□□□□ -0.57
CCDC84-209ENST00000580556 CUTCQ9NTM9 273 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 VPS29Q9UBQ0 182 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 CCL27Q9Y4X3 112 aa11.51□□□□□ -0.57
CCDC84-209ENST00000580556 TMEM184BQ9Y519 407 aaPredicted RBP11.51□□□□□ -0.57
CCDC84-209ENST00000580556 B3GALT1Q9Y5Z6 326 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms