RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 SNX15Q9NRS6 342 aa6.08□□□□□ -1.44
PPP4R1-216ENST00000580283 ETNK2Q9NVF9 386 aa6.08□□□□□ -1.44
PPP4R1-216ENST00000580283 RMND1Q9NWS8 449 aa6.08□□□□□ -1.44
PPP4R1-216ENST00000580283 MAN1B1Q9UKM7 699 aa6.08□□□□□ -1.44
PPP4R1-216ENST00000580283 BTRCQ9Y297 605 aa6.08□□□□□ -1.44
PPP4R1-216ENST00000580283 DNAJC16Q9Y2G8 782 aa6.08□□□□□ -1.44
PPP4R1-216ENST00000580283 DNAJC9-AS1A6NH13 148 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 SLC9B1P1A6NJY1 282 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 DFFAO00273 331 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 PSMA7O14818 248 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 ZBTB11O95625 1053 aaPredicted RBP6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 LSM8O95777 96 aaKnown RBP6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 MT-ND5P03915 603 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 ALPPP05187 535 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 KRT3P12035 628 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 UNGP13051 313 aaPredicted RBP6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 CREB1P16220 341 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 ZNF30P17039 623 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 BTF3P20290 206 aaKnown RBP6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 HADHAP40939 763 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 SPINT3P49223 89 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 RENBPP51606 427 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 TIAL1Q01085 375 aaKnown RBP eCLIP6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 FOXD4Q12950 439 aaPredicted RBP6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 CAMK4Q16566 473 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 EXOC3L4Q17RC7 722 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 RNASE12Q5GAN4 147 aaKnown RBP6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 ARMC12Q5T9G4 340 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 CYB5D1Q6P9G0 228 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 FAM83HQ6ZRV2 1179 aaPredicted RBP6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 Q71RC1 249 aaPredicted RBP6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 RAB43Q86YS6 212 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 CEP97Q8IW35 865 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 TTC30BQ8N4P2 665 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 PAF1Q8N7H5 531 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 CLEC1AQ8NC01 280 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 OR8K5Q8NH50 307 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 NR4A3Q92570 626 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 CNDP1Q96KN2 507 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 FER1L6-AS2Q96M78 137 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 AGAP3Q96P47 875 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 PEBP4Q96S96 227 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 C11orf70Q9BRQ4 267 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 ACTR5Q9H9F9 607 aaPredicted RBP6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 TRIM36Q9NQ86 728 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 SLC22A11Q9NSA0 550 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 POT1Q9NUX5 634 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 TBC1D23Q9NUY8 699 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 OLAHQ9NV23 265 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 NOCTQ9UK39 431 aaKnown RBP6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 CORO2BQ9UQ03 480 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 TNFRSF18Q9Y5U5 241 aa6.07□□□□□ -1.44
PPP4R1-216ENST00000580283 GTPBP10A4D1E9 387 aaKnown RBP6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 OR5K3A6NET4 321 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 SIGLEC16A6NMB1 481 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 PDZK1P1A8MUH7 402 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 TMEM150CB9EJG8 249 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 AGPSO00116 658 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 PPP6CO00743 305 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 SOCS6O14544 535 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 ZNHIT1O43257 154 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 ZNF749O43361 778 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 MTX2O75431 263 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 USP1O94782 785 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 GNA14O95837 355 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 PYGLP06737 847 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 CHRM5P08912 532 aaPredicted RBP6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 PRR35P0CG20 571 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 IGFBP2P18065 325 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 AGAP20933 346 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 ARCN1P48444 511 aaKnown RBP6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 GSCP56915 257 aaPredicted RBP6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 TPI1P60174 286 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 PSG6Q00889 435 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 LTBQ06643 244 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 DPYSQ14117 519 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 ASIC2Q16515 512 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 RPE65Q16518 533 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 C3AR1Q16581 482 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 TDRD12Q587J7 1177 aaKnown RBP6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 DNTTIP2Q5QJE6 756 aaKnown RBP6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 FAM182AQ5T1J6 154 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 KLHDC7AQ5VTJ3 777 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 MLIPQ5VWP3 458 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 PLAG1Q6DJT9 500 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 MZT2AQ6P582 158 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 TMEM207Q6UWW9 146 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 GFRALQ6UXV0 394 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 ZNF66Q6ZN08 573 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 RFX8Q6ZV50 586 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 RNF44Q7L0R7 432 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 BCORP1Q8N888 145 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 GPR26Q8NDV2 337 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 OR1N1Q8NGS0 311 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 OR2Y1Q8NGV0 311 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 TM9SF4Q92544 642 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 SMARCE1Q969G3 411 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 CXorf40BQ96DE9 158 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 ZNF599Q96NL3 588 aa6.06□□□□□ -1.44
PPP4R1-216ENST00000580283 IP6K3Q96PC2 410 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms