RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PNO1Q9NRX1 252 aaKnown RBP16.72■□□□□ 0.27
MKS1-209ENST00000580127 SETD2Q9BYW2 2564 aaPredicted RBP16.71■□□□□ 0.27
MKS1-209ENST00000580127 ZFAND5O76080 213 aa16.71■□□□□ 0.27
MKS1-209ENST00000580127 MYO1DO94832 1006 aa16.71■□□□□ 0.27
MKS1-209ENST00000580127 TFEBP19484 476 aa16.71■□□□□ 0.27
MKS1-209ENST00000580127 HSD17B7P56937 341 aa16.71■□□□□ 0.27
MKS1-209ENST00000580127 TIAL1Q01085 375 aaKnown RBP eCLIP16.71■□□□□ 0.27
MKS1-209ENST00000580127 CYP1B1Q16678 543 aa16.71■□□□□ 0.27
MKS1-209ENST00000580127 CES4AQ5XG92 561 aa16.71■□□□□ 0.27
MKS1-209ENST00000580127 NXPE4Q6UWF7 544 aa16.71■□□□□ 0.27
MKS1-209ENST00000580127 CD163Q86VB7 1156 aa16.71■□□□□ 0.27
MKS1-209ENST00000580127 THOC6Q86W42 341 aaKnown RBP16.71■□□□□ 0.27
MKS1-209ENST00000580127 RASGEF1CQ8N431 466 aa16.71■□□□□ 0.27
MKS1-209ENST00000580127 ZFP62Q8NB50 900 aaPredicted RBP16.71■□□□□ 0.27
MKS1-209ENST00000580127 OR4K3Q96R72 315 aa16.71■□□□□ 0.27
MKS1-209ENST00000580127 NPLQ9BXD5 320 aaPredicted RBP16.71■□□□□ 0.27
MKS1-209ENST00000580127 SLC6A16Q9GZN6 736 aa16.71■□□□□ 0.27
MKS1-209ENST00000580127 HIVEP1P15822 2718 aa16.71■□□□□ 0.27
MKS1-209ENST00000580127 IGKV3D-11A0A0A0MRZ8 115 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 ACOT7O00154 380 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 PGRMC1O00264 195 aaKnown RBP16.7■□□□□ 0.26
MKS1-209ENST00000580127 HS6ST1O60243 411 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 DNAJB6O75190 326 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 ITGA10O75578 1167 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 SAT1P21673 171 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 HNMTP50135 292 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 BTN3A2P78410 334 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 PLGLB1Q02325 96 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 SLC13A2Q13183 592 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 KCTD19Q17RG1 926 aaPredicted RBP16.7■□□□□ 0.26
MKS1-209ENST00000580127 TOR1AIP1Q5JTV8 583 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 FAM45BPQ6NSW5 357 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 NCCRP1Q6ZVX7 275 aaPredicted RBP16.7■□□□□ 0.26
MKS1-209ENST00000580127 ZNF227Q86WZ6 799 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 GAS2L3Q86XJ1 694 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 CNTN4Q8IWV2 1026 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 CHERPQ8IWX8 916 aaKnown RBP16.7■□□□□ 0.26
MKS1-209ENST00000580127 TMEM132CQ8N3T6 1108 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 ACBD4Q8NC06 268 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 C7orf57Q8NEG2 295 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 FAM45AQ8TCE6 357 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 ANKRD7Q92527 254 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 TSNARE1Q96NA8 513 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 TREX2Q9BQ50 279 aaPredicted RBP16.7■□□□□ 0.26
MKS1-209ENST00000580127 CAPS2Q9BXY5 557 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 NECTIN3Q9NQS3 549 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 NEU2Q9Y3R4 380 aa16.7■□□□□ 0.26
MKS1-209ENST00000580127 INTS1Q8N201 2190 aaKnown RBP16.7■□□□□ 0.26
MKS1-209ENST00000580127 ADGRG4Q8IZF6 3080 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 A8MVJ9 347 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 ZNHIT1O43257 154 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 B3GALT4O96024 378 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 SMIM10L1P0DMW3 83 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 GNAZP19086 355 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 GSTM2P28161 218 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 GABRB3P28472 473 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 RFC3P40938 356 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 FNTAP49354 379 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 KRTAP10-9P60411 292 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 REEP5Q00765 189 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 TESK1Q15569 626 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 RBM20Q5T481 1227 aaKnown RBP16.69■□□□□ 0.26
MKS1-209ENST00000580127 FGD2Q7Z6J4 655 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 SPNS2Q8IVW8 549 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 CLYBLQ8N0X4 340 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 PDIK1LQ8N165 341 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 KRT78Q8N1N4 520 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 CA13Q8N1Q1 262 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 NKAPQ8N5F7 415 aaKnown RBP16.69■□□□□ 0.26
MKS1-209ENST00000580127 MYRIPQ8NFW9 859 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 ASB15Q8WXK1 588 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 CERS2Q96G23 380 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 SMIM10Q96HG1 83 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 MS4A14Q96JA4 679 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 SEC16BQ96JE7 1060 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 EGFL8Q99944 293 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 ZNF559Q9BR84 538 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 PRTFDC1Q9NRG1 225 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 HPF1Q9NWY4 346 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 ASIC3Q9UHC3 531 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 SLC22A14Q9Y267 594 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 CLCA3PQ9Y6N3 262 aa16.69■□□□□ 0.26
MKS1-209ENST00000580127 B3GALT2O43825 422 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 PDE9AO76083 593 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 PPIAP62937 165 aaKnown RBP16.68■□□□□ 0.26
MKS1-209ENST00000580127 TGM3Q08188 693 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 PMPCAQ10713 525 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 HYAL2Q12891 473 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 BMPR2Q13873 1038 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 CMPK2Q5EBM0 449 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 RNASEH2BQ5TBB1 312 aaKnown RBP16.68■□□□□ 0.26
MKS1-209ENST00000580127 TMIGD1Q6UXZ0 262 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 TMPRSS11BQ86T26 416 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 SLC22A16Q86VW1 577 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 ZNF595Q8IYB9 648 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 AGGF1Q8N302 714 aaeCLIP16.68■□□□□ 0.26
MKS1-209ENST00000580127 ANKRD53Q8N9V6 530 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 APCDD1LQ8NCL9 501 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 CREB3L4Q8TEY5 395 aa16.68■□□□□ 0.26
MKS1-209ENST00000580127 CCT6BQ92526 530 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms