RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 SFT2D3Q587I9 215 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 SGO1Q5FBB7 561 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 ABHD17BQ5VST6 288 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 LIPJQ5W064 366 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 ADGRD1Q6QNK2 874 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 LANCL3Q6ZV70 420 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 GSPT2Q8IYD1 628 aaKnown RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 PLD6Q8N2A8 252 aaKnown RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 AFAP1L2Q8N4X5 818 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 SIRT6Q8N6T7 355 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 EIF1ADQ8N9N8 165 aaKnown RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 OR2L5Q8NG80 312 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 OR7G3Q8NG95 312 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 SUN3Q8TAQ9 357 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 CREB3L4Q8TEY5 395 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 RGMAQ96B86 450 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 MS4A6EQ96DS6 147 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 WDR34Q96EX3 536 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 CMTM7Q96FZ5 175 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 GPR78Q96P69 363 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 KCNC2Q96PR1 638 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 SERINC2Q96SA4 455 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 MTERF1Q99551 399 aaKnown RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 LPAR4Q99677 370 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 SMAD5Q99717 465 aaKnown RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 MESP1Q9BRJ9 268 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 TBCDQ9BTW9 1192 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 TUBB6Q9BUF5 446 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF700Q9H0M5 742 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 EPN3Q9H201 632 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 MRPL46Q9H2W6 279 aaKnown RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF552Q9H707 407 aaPredicted RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 NOL11Q9H8H0 719 aaKnown RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 KCNK13Q9HB14 408 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 MLXIPLQ9NP71 852 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 PNO1Q9NRX1 252 aaKnown RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 PSMC3IPQ9P2W1 217 aaPredicted RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 XPR1Q9UBH6 696 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 DCDC2Q9UHG0 476 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 ADGRE2Q9UHX3 823 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 VPS4AQ9UN37 437 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 B3GNT3Q9Y2A9 372 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 PCDHGA11Q9Y5H2 935 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 SETXQ7Z333 2677 aaKnown RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 LRRC14BA6NHZ5 514 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 A8MUA0 341 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 ESPNB1AK53 854 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 SUPT7LO94864 414 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 WISP1O95388 367 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 IFNA16P05015 189 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 CYC1P08574 325 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 PYGBP11216 843 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 COX6A1P12074 109 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 MTHFD2P13995 350 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 TLX1P31314 330 aaPredicted RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 HNRNPH1P31943 449 aaKnown RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 PIK3CBP42338 1070 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 SSR2P43308 183 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 CSRP3P50461 194 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 NEK2P51955 445 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 SNRPNP63162 240 aaKnown RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 BTG2P78543 158 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF33BQ06732 778 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 Q0VFX4 171 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 STX4Q12846 297 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 HYAL2Q12891 473 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 SLAMF1Q13291 335 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 PCBP2Q15366 365 aaKnown RBP eCLIP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 TLR1Q15399 786 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 ZRSR2Q15696 482 aaKnown RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 EXT1Q16394 746 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 PLEKHN1Q494U1 663 aaPredicted RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 TECRLQ5HYJ1 363 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 CRB2Q5IJ48 1285 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 KHDRBS2Q5VWX1 349 aaKnown RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 OR4C11Q6IEV9 310 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 METTL2BQ6P1Q9 378 aaKnown RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 ABHD17CQ6PCB6 329 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 CYP20A1Q6UW02 462 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 TMEM205Q6UW68 189 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 RIPOR1Q6ZS17 1223 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 GOLGA7Q7Z5G4 137 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 MILR1Q7Z6M3 343 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 ANKRD37Q7Z713 158 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 LCA5Q86VQ0 697 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 IQCKQ8N0W5 287 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 CISD2Q8N5K1 135 aaKnown RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 CCNYL1Q8N7R7 359 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 CCDC63Q8NA47 563 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 PLPP5Q8NEB5 264 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 OR1N1Q8NGS0 311 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 HUS1BQ8NHY5 278 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 CPT1CQ8TCG5 803 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 BRIX1Q8TDN6 353 aaKnown RBP6.17□□□□□ -1.42
TRAF4-213ENST00000578917 ACMSDQ8TDX5 336 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 UBTD2Q8WUN7 234 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 PNPLA2Q96AD5 504 aa6.17□□□□□ -1.42
TRAF4-213ENST00000578917 LMF1Q96S06 567 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms