RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 GPR85P60893 370 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 TSNQ15631 228 aaKnown RBP8.35□□□□□ -1.07
GGA3-207ENST00000578896 KRTCAP3Q53RY4 240 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 STEAP4Q687X5 459 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 ADNP2Q6IQ32 1131 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 XKRXQ6PP77 449 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 RPTNQ6XPR3 784 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 QSOX2Q6ZRP7 698 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 ABHD13Q7L211 337 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 MDGA2Q7Z553 956 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 STRA8Q7Z7C7 330 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 CLNKQ7Z7G1 428 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 CEP97Q8IW35 865 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 SULF2Q8IWU5 870 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.35□□□□□ -1.07
GGA3-207ENST00000578896 PDIK1LQ8N165 341 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 TBC1D19Q8N5T2 526 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 GABPB2Q8TAK5 448 aaPredicted RBP8.35□□□□□ -1.07
GGA3-207ENST00000578896 ATL1Q8WXF7 558 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 CCT6BQ92526 530 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 MTFMTQ96DP5 389 aaKnown RBP8.35□□□□□ -1.07
GGA3-207ENST00000578896 SMIM10Q96HG1 83 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 PDLIM2Q96JY6 352 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 EGFL8Q99944 293 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 AIF1LQ9BQI0 150 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 DEFB126Q9BYW3 111 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 FAM129AQ9BZQ8 928 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 TRIM8Q9BZR9 551 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 PELI2Q9HAT8 420 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 SMYD2Q9NRG4 433 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 ZNF223Q9UK11 482 aaPredicted RBP8.35□□□□□ -1.07
GGA3-207ENST00000578896 FBXW2Q9UKT8 454 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 ASB1Q9Y576 335 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 PCDHGB6Q9Y5F9 930 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 HRH3Q9Y5N1 445 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 TEX264Q9Y6I9 313 aa8.35□□□□□ -1.07
GGA3-207ENST00000578896 MPDZO75970 2070 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 MED12Q93074 2177 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 MAP1AP78559 2803 aaPredicted RBP8.34□□□□□ -1.07
GGA3-207ENST00000578896 IGKV3D-11A0A0A0MRZ8 115 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 A0A1B0GTH9 108 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 TCRBV16S1A1N1A0A5B0 115 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 USP27XA6NNY8 438 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 ADAM10O14672 748 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 HS6ST1O60243 411 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 PRAMEF4O60810 478 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 SH3BGRLO75368 114 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 WDR47O94967 919 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 CLDN14O95500 239 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 ENO2P09104 434 aaPredicted RBP8.34□□□□□ -1.07
GGA3-207ENST00000578896 ZNF24P17028 368 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 ELAVL4P26378 380 aaKnown RBP8.34□□□□□ -1.07
GGA3-207ENST00000578896 HNRNPH1P31943 449 aaKnown RBP8.34□□□□□ -1.07
GGA3-207ENST00000578896 HLCSP50747 726 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 SMSP52788 366 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 PLA2G16P53816 162 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 MGAT5Q09328 741 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 PDIA2Q13087 525 aaKnown RBP8.34□□□□□ -1.07
GGA3-207ENST00000578896 SLBPQ14493 270 aaKnown RBP eCLIP8.34□□□□□ -1.07
GGA3-207ENST00000578896 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.34□□□□□ -1.07
GGA3-207ENST00000578896 PRAMEF9Q5VWM5 478 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 MTFR2Q6P444 385 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 Q6ZPB1 254 aaPredicted RBP8.34□□□□□ -1.07
GGA3-207ENST00000578896 SLCO4C1Q6ZQN7 724 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 GDF7Q7Z4P5 450 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 ZC3HC1Q86WB0 502 aaKnown RBP8.34□□□□□ -1.07
GGA3-207ENST00000578896 GHDCQ8N2G8 530 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 HORMAD2Q8N7B1 307 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 FAM47BQ8NA70 645 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 FAM98AQ8NCA5 519 aaKnown RBP8.34□□□□□ -1.07
GGA3-207ENST00000578896 APCDD1LQ8NCL9 501 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 FBXO36Q8NEA4 188 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 TRPV3Q8NET8 790 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 PDLIM5Q96HC4 596 aaKnown RBP8.34□□□□□ -1.07
GGA3-207ENST00000578896 LURAP1Q96LR2 239 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 NAT9Q9BTE0 207 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 DEFB127Q9H1M4 99 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 KCNF1Q9H3M0 494 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 RUBCNLQ9H714 662 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 CAB39LQ9H9S4 337 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 CHST11Q9NPF2 352 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 PRDM9Q9NQV7 894 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 CTNNAL1Q9UBT7 734 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 MTO1Q9Y2Z2 717 aaKnown RBP8.34□□□□□ -1.07
GGA3-207ENST00000578896 SNX24Q9Y343 169 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 CLDN16Q9Y5I7 305 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 KCNE2Q9Y6J6 123 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 NAV3Q8IVL0 2385 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 HCFC1P51610 2035 aa8.34□□□□□ -1.07
GGA3-207ENST00000578896 A0A0G2JMM0 328 aa8.33□□□□□ -1.08
GGA3-207ENST00000578896 A0A1W2PPB8 328 aa8.33□□□□□ -1.08
GGA3-207ENST00000578896 A0A1W2PRS3 328 aa8.33□□□□□ -1.08
GGA3-207ENST00000578896 PINLYPA6NC86 204 aa8.33□□□□□ -1.08
GGA3-207ENST00000578896 URADA6NGE7 173 aa8.33□□□□□ -1.08
GGA3-207ENST00000578896 KIR3DP1A8MWS1 328 aa8.33□□□□□ -1.08
GGA3-207ENST00000578896 CXorf49A8MYA2 514 aaPredicted RBP8.33□□□□□ -1.08
GGA3-207ENST00000578896 G3V3Y1 287 aa8.33□□□□□ -1.08
GGA3-207ENST00000578896 TFECO14948 347 aaPredicted RBP8.33□□□□□ -1.08
GGA3-207ENST00000578896 TP73O15350 636 aa8.33□□□□□ -1.08
GGA3-207ENST00000578896 TAPBPO15533 448 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms