RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 ARMC2Q8NEN0 867 aa14.88□□□□□ -0.03
CRLF3-203ENST00000578692 GAL3ST3Q96A11 431 aa14.88□□□□□ -0.03
CRLF3-203ENST00000578692 MS4A6EQ96DS6 147 aa14.88□□□□□ -0.03
CRLF3-203ENST00000578692 SEC16BQ96JE7 1060 aa14.88□□□□□ -0.03
CRLF3-203ENST00000578692 UBXN10Q96LJ8 280 aa14.88□□□□□ -0.03
CRLF3-203ENST00000578692 TMEM79Q9BSE2 394 aa14.88□□□□□ -0.03
CRLF3-203ENST00000578692 NPLQ9BXD5 320 aaPredicted RBP14.88□□□□□ -0.03
CRLF3-203ENST00000578692 PITHD1Q9GZP4 211 aaPredicted RBP14.88□□□□□ -0.03
CRLF3-203ENST00000578692 DNAJC11Q9NVH1 559 aa14.88□□□□□ -0.03
CRLF3-203ENST00000578692 CD274Q9NZQ7 290 aa14.88□□□□□ -0.03
CRLF3-203ENST00000578692 CROCCQ5TZA2 2017 aa14.88□□□□□ -0.03
CRLF3-203ENST00000578692 IGKV3D-11A0A0A0MRZ8 115 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 A0A0G2JN53 185 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 SAGE2PA6NJ88 616 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 CDK2AP1O14519 115 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 ERI3O43414 337 aaKnown RBP14.87□□□□□ -0.03
CRLF3-203ENST00000578692 CLEC3AO75596 197 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 STK16O75716 305 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 C1QAP02745 245 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 EEF1DP29692 281 aaKnown RBP14.87□□□□□ -0.03
CRLF3-203ENST00000578692 HNRNPH1P31943 449 aaKnown RBP14.87□□□□□ -0.03
CRLF3-203ENST00000578692 HSPA7P48741 367 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 RAB10P61026 200 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 RUNX2Q13950 521 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 OR4D1Q15615 310 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 ZKSCAN8Q15776 578 aaPredicted RBP14.87□□□□□ -0.03
CRLF3-203ENST00000578692 SLC25A25Q6KCM7 469 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 TMEM178AQ8NBL3 297 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 NFAM1Q8NET5 270 aaPredicted RBP14.87□□□□□ -0.03
CRLF3-203ENST00000578692 KIAA1191Q96A73 305 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 SCMH1Q96GD3 660 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 HES7Q9BYE0 225 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 PHACTR1Q9C0D0 580 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 RAB17Q9H0T7 212 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 EHD1Q9H4M9 534 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 LRFN1Q9P244 771 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 PTBP2Q9UKA9 531 aaKnown RBP14.87□□□□□ -0.03
CRLF3-203ENST00000578692 ZNF490Q9ULM2 529 aaPredicted RBP14.87□□□□□ -0.03
CRLF3-203ENST00000578692 MMACHCQ9Y4U1 282 aa14.87□□□□□ -0.03
CRLF3-203ENST00000578692 TRGV8A0A0C4DH27 118 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 PRAMEF4O60810 478 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 WISP2O76076 250 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 SP1P08047 785 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 HPDP32754 393 aaPredicted RBP14.86□□□□□ -0.03
CRLF3-203ENST00000578692 MAGEA4P43358 317 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 KCNC1P48547 511 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 ETF1P62495 437 aaKnown RBP14.86□□□□□ -0.03
CRLF3-203ENST00000578692 RBPJQ06330 500 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 DOC2AQ14183 400 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 TRADDQ15628 312 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 KBTBD12Q3ZCT8 623 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 XKR6Q5GH73 641 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 PRAMEF9Q5VWM5 478 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 SYT10Q6XYQ8 523 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 GALNTL5Q7Z4T8 443 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 CCDC25Q86WR0 208 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 PPM1NQ8N819 430 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 SNX31Q8N9S9 440 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 PDPRQ8NCN5 879 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 FBXO25Q8TCJ0 367 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 PTCD3Q96EY7 689 aaKnown RBP14.86□□□□□ -0.03
CRLF3-203ENST00000578692 REXO4Q9GZR2 422 aaKnown RBP14.86□□□□□ -0.03
CRLF3-203ENST00000578692 RNF112Q9ULX5 631 aa14.86□□□□□ -0.03
CRLF3-203ENST00000578692 A0A088AWK7 358 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 ASPDHA6ND91 283 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 CLDN4O14493 209 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 B3GALT2O43825 422 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 CCNT2O60583 730 aaKnown RBP14.85□□□□□ -0.03
CRLF3-203ENST00000578692 FAM155BO75949 473 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 NEURL1O76050 574 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 TBX6O95947 436 aaPredicted RBP14.85□□□□□ -0.03
CRLF3-203ENST00000578692 S100BP04271 92 aaPredicted RBP14.85□□□□□ -0.03
CRLF3-203ENST00000578692 ZNF10P21506 573 aaPredicted RBP14.85□□□□□ -0.03
CRLF3-203ENST00000578692 TPP2P29144 1249 aaPredicted RBP14.85□□□□□ -0.03
CRLF3-203ENST00000578692 PLA2G16P53816 162 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 RAB38P57729 211 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 MLF1P58340 268 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 LAPTM5Q13571 262 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 PDK4Q16654 411 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.85□□□□□ -0.03
CRLF3-203ENST00000578692 ADPRMQ3LIE5 342 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 ZNF468Q5VIY5 522 aaPredicted RBP14.85□□□□□ -0.03
CRLF3-203ENST00000578692 TRIM40Q6P9F5 258 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 RAPH1Q70E73 1250 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 VN1R5Q7Z5H4 357 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 C17orf53Q8N3J3 647 aaPredicted RBP14.85□□□□□ -0.03
CRLF3-203ENST00000578692 FAM98AQ8NCA5 519 aaKnown RBP14.85□□□□□ -0.03
CRLF3-203ENST00000578692 OR2L5Q8NG80 312 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 STAG3L4Q8TBR4 150 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 FBF1Q8TES7 1133 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 WDR34Q96EX3 536 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 QRFPRQ96P65 431 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 EFCAB11Q9BUY7 163 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 DEFB126Q9BYW3 111 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 CD244Q9BZW8 370 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 PRTFDC1Q9NRG1 225 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.85□□□□□ -0.03
CRLF3-203ENST00000578692 CCL21O00585 134 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 MLYCDO95822 493 aa14.85□□□□□ -0.03
CRLF3-203ENST00000578692 GMPRP36959 345 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms