RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CDKN2CP42773 168 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 CRATP43155 626 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 RPS9P46781 194 aaKnown RBP10.62□□□□□ -0.71
SKA2-204ENST00000578519 RPS6KA3P51812 740 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 CYP4F2P78329 520 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 GNA13Q14344 377 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 MLC1Q15049 377 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 RGNQ15493 299 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 ZIC1Q15915 447 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 ALG11Q2TAA5 492 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 COL13A1Q5TAT6 717 aaPredicted RBP10.62□□□□□ -0.71
SKA2-204ENST00000578519 TTC23Q5W5X9 447 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 KLHL35Q6PF15 583 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 ANGPTL8Q6UXH0 198 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 VN1R5Q7Z5H4 357 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 OOSP2Q86WS3 158 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.62□□□□□ -0.71
SKA2-204ENST00000578519 ZZZ3Q8IYH5 903 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 CLECL1Q8IZS7 167 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 CLEC4FQ8N1N0 589 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 CBR4Q8N4T8 237 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 METTL25Q8N6Q8 603 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 ZNF555Q8NEP9 628 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 OR2L5Q8NG80 312 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 OR4E2Q8NGC2 313 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 NETO1Q8TDF5 533 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 GPBAR1Q8TDU6 330 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 MOAP1Q96BY2 351 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 TBC1D20Q96BZ9 403 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 TM4SF18Q96CE8 201 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 PDXPQ96GD0 296 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 CNBD2Q96M20 576 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 RBM4BQ9BQ04 359 aaKnown RBP10.62□□□□□ -0.71
SKA2-204ENST00000578519 RBM4Q9BWF3 364 aaKnown RBP10.62□□□□□ -0.71
SKA2-204ENST00000578519 SPNS1Q9H2V7 528 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 TMEM38AQ9H6F2 299 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 SEMA3GQ9NS98 782 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 PNPLA3Q9NST1 481 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 SMPD3Q9NY59 655 aaPredicted RBP10.62□□□□□ -0.71
SKA2-204ENST00000578519 TAS2R7Q9NYW3 318 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 WNT16Q9UBV4 365 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 TBC1D29Q9UFV1 150 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 FBXL21Q9UKT6 434 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 PADI4Q9UM07 663 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 CYP8B1Q9UNU6 501 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 ANGPT4Q9Y264 503 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 ZNF451Q9Y4E5 1061 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 PDE4DIPQ5VU43 2346 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 A0A1W2PPC4 97 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 FEZF1A0PJY2 475 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 C1orf226A1L170 272 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 LRIT2A6NDA9 550 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 C2orf74A8MZ97 194 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 C5orf58C9J3I9 102 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 G3V2T6 193 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 H0YAE9 185 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 SUV39H1O43463 412 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 NARSO43776 548 aaKnown RBP10.61□□□□□ -0.71
SKA2-204ENST00000578519 E2F6O75461 281 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 PDE9AO76083 593 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 PRSS23O95084 383 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 ZNF682O95780 498 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 C6orf47O95873 294 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 SLC35G6P0C7Q6 338 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 THEGLP0DJG4 465 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 CKMT2P17540 419 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 PSMB5P28074 263 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 SOAT1P35610 550 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 ALDH9A1P49189 494 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 ALDH3A2P51648 485 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 RAD23AP54725 363 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 MERTKQ12866 999 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 GK3PQ14409 553 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 SUZ12Q15022 739 aaKnown RBP10.61□□□□□ -0.71
SKA2-204ENST00000578519 SLC5A12Q1EHB4 618 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 SPDYE7PQ495Y7 208 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 LRRC23Q53EV4 343 aaPredicted RBP10.61□□□□□ -0.71
SKA2-204ENST00000578519 PRRT3Q5FWE3 981 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 TJAP1Q5JTD0 557 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 MANEAQ5SRI9 462 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 ANKRD26P1Q6NSI1 321 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 IYDQ6PHW0 289 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 SLC30A9Q6PML9 568 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 SLC36A4Q6YBV0 504 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 CBLL1Q75N03 491 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 TAF8Q7Z7C8 310 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 PATL1Q86TB9 770 aaKnown RBP10.61□□□□□ -0.71
SKA2-204ENST00000578519 IQCHQ86VS3 1027 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 ZDHHC21Q8IVQ6 265 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 SDR16C5Q8N3Y7 309 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 ANKRD53Q8N9V6 530 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 CAMKVQ8NCB2 501 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 FLCNQ8NFG4 579 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 CREB3L4Q8TEY5 395 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 NUDT8Q8WV74 236 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 NRBF2Q96F24 287 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 AURKBQ96GD4 344 aaPredicted RBP10.61□□□□□ -0.71
SKA2-204ENST00000578519 GPR174Q9BXC1 333 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 MRPS26Q9BYN8 205 aaKnown RBP10.61□□□□□ -0.71
SKA2-204ENST00000578519 ANKRD60Q9BZ19 345 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms