RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 EFSO43281 561 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 ERI3O43414 337 aaKnown RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 B3GALT2O43825 422 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 CRCPO75575 148 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 KLF7O75840 302 aaPredicted RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 TBX6O95947 436 aaPredicted RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 ZNF888P0CJ79 500 aaPredicted RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 NEFHP12036 1026 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 RNH1P13489 461 aaKnown RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 JAK1P23458 1154 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 HNRNPH1P31943 449 aaKnown RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 FOLR3P41439 243 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 OR1D4P47884 311 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 RAP1GDS1P52306 607 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 CXADRP78310 365 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 CYP4F2P78329 520 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 BIKQ13323 160 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 MPP2Q14168 576 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 SLC9A5Q14940 896 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 NKG7Q16617 165 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 UGT8Q16880 541 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 DEFB134Q4QY38 66 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 ATG16L1Q676U5 607 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 OR4C11Q6IEV9 310 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 FAM199XQ6PEV8 388 aaPredicted RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 INO80CQ6PI98 192 aaPredicted RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 GPR155Q7Z3F1 870 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 RAB43Q86YS6 212 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 CLYBLQ8N0X4 340 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 ZCCHC7Q8N3Z6 543 aaKnown RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 ENDOVQ8N8Q3 282 aaKnown RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 CDYL2Q8N8U2 506 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 AMER3Q8N944 861 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 OR9A4Q8NGU2 314 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 SELENOMQ8WWX9 145 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 ARL8AQ96BM9 186 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 CDK15Q96Q40 435 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 MTERF1Q99551 399 aaKnown RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 KLHL31Q9H511 634 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 ACTL8Q9H568 366 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 AKIRIN1Q9H9L7 192 aaPredicted RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 COPS7BQ9H9Q2 264 aaPredicted RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 LYRM4Q9HD34 91 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 PRM3Q9NNZ6 103 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 MED4Q9NPJ6 270 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 PRDM7Q9NQW5 492 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 TRPC4Q9UBN4 977 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 MRPS33Q9Y291 106 aaKnown RBP11.72□□□□□ -0.53
RARA-208ENST00000577646 SPACA6W5XKT8 324 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 SPTBP11277 2137 aa11.72□□□□□ -0.53
RARA-208ENST00000577646 MAGEB17A8MXT2 336 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 NPIPB8E9PQR5 432 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 PPP6CO00743 305 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 UBFD1O14562 309 aaKnown RBP11.71□□□□□ -0.53
RARA-208ENST00000577646 KLF11O14901 512 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 AZIN1O14977 448 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 GUCY1B2O75343 617 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 BMP10O95393 424 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 MED26O95402 600 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 TGFB1P01137 390 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 ZGLP1P0C6A0 271 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 IL1RNP18510 177 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 GSTM5P46439 218 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 RPS13P62277 151 aaKnown RBP11.71□□□□□ -0.53
RARA-208ENST00000577646 BTN3A2P78410 334 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 DDX39BQ13838 428 aaKnown RBP11.71□□□□□ -0.53
RARA-208ENST00000577646 TUBB8Q3ZCM7 444 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 HSP90B2PQ58FF3 399 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 ARL13AQ5H913 290 aaPredicted RBP11.71□□□□□ -0.53
RARA-208ENST00000577646 LCN10Q6JVE6 187 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 COX15Q7KZN9 410 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 TRIM46Q7Z4K8 759 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 OR51Q1Q8NH59 317 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 FAM76AQ8TAV0 307 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 ZCCHC10Q8TBK6 192 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 STT3BQ8TCJ2 826 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 STARD8Q92502 1023 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 TBC1D20Q96BZ9 403 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 CRELD1Q96HD1 420 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 F2RL3Q96RI0 385 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 UBL7Q96S82 380 aaPredicted RBP11.71□□□□□ -0.53
RARA-208ENST00000577646 MACROD1Q9BQ69 325 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 PRORYQ9H606 182 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 DDX31Q9H8H2 851 aaKnown RBP11.71□□□□□ -0.53
RARA-208ENST00000577646 PRDM9Q9NQV7 894 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 SIRT5Q9NXA8 310 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 VPS29Q9UBQ0 182 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 PHF11Q9UIL8 331 aa11.71□□□□□ -0.53
RARA-208ENST00000577646 WBP11Q9Y2W2 641 aaKnown RBP11.71□□□□□ -0.53
RARA-208ENST00000577646 MRPS2Q9Y399 296 aaKnown RBP11.71□□□□□ -0.53
RARA-208ENST00000577646 PTPRQQ9UMZ3 2332 aa11.7□□□□□ -0.54
RARA-208ENST00000577646 SGK494L7N484 410 aa11.7□□□□□ -0.54
RARA-208ENST00000577646 PSMD12O00232 456 aaPredicted RBP11.7□□□□□ -0.54
RARA-208ENST00000577646 SLC28A1O00337 649 aa11.7□□□□□ -0.54
RARA-208ENST00000577646 CLDN4O14493 209 aa11.7□□□□□ -0.54
RARA-208ENST00000577646 DYNC1I1O14576 645 aa11.7□□□□□ -0.54
RARA-208ENST00000577646 FFAR3O14843 346 aa11.7□□□□□ -0.54
RARA-208ENST00000577646 GPR42O15529 346 aa11.7□□□□□ -0.54
RARA-208ENST00000577646 CHST10O43529 356 aa11.7□□□□□ -0.54
RARA-208ENST00000577646 KLHL41O60662 606 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms