RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 GPN1Q9HCN4 374 aaPredicted RBP2.19□□□□□ -2.06
COPS3-213ENST00000577210 DBF4Q9UBU7 674 aaPredicted RBP2.19□□□□□ -2.06
COPS3-213ENST00000577210 TEKT2Q9UIF3 430 aa2.19□□□□□ -2.06
COPS3-213ENST00000577210 NOCTQ9UK39 431 aaKnown RBP2.19□□□□□ -2.06
COPS3-213ENST00000577210 GPR132Q9UNW8 380 aa2.19□□□□□ -2.06
COPS3-213ENST00000577210 PPP2R2CQ9Y2T4 447 aa2.19□□□□□ -2.06
COPS3-213ENST00000577210 HBS1LQ9Y450 684 aaKnown RBP2.19□□□□□ -2.06
COPS3-213ENST00000577210 CSNK1G3Q9Y6M4 447 aa2.19□□□□□ -2.06
COPS3-213ENST00000577210 HEG1Q9ULI3 1381 aa2.19□□□□□ -2.06
COPS3-213ENST00000577210 NOTCH4Q99466 2003 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 IGKV3D-15A0A087WSY6 115 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 A0A087WZ39 114 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 A0A0J9YWU9 116 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 C5orf51A6NDU8 294 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 CCDC69A6NI79 296 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 MPTX1A8MV57 137 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.18□□□□□ -2.06
COPS3-213ENST00000577210 RNF103O00237 685 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 TTI1O43156 1089 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 ZG16O60844 167 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 ATP9AO75110 1047 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 SEC22BO75396 215 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 LETM1O95202 739 aaPredicted RBP2.18□□□□□ -2.06
COPS3-213ENST00000577210 SLC16A8O95907 504 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 SBK2P0C263 348 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 DESP17661 470 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 VCLP18206 1134 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 UGT1A4P22310 534 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 ALDH1B1P30837 517 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 GPR183P32249 361 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 RPL9P32969 192 aaKnown RBP2.18□□□□□ -2.06
COPS3-213ENST00000577210 CD86P42081 329 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 MAGEB1P43366 347 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 UCP2P55851 309 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 EVCP57679 992 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 GALK2Q01415 458 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 ELAVL2Q12926 359 aaKnown RBP2.18□□□□□ -2.06
COPS3-213ENST00000577210 TMEM132DQ14C87 1099 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 RPS6KA1Q15418 735 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 MOGAT2Q3SYC2 334 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 AARDQ4LEZ3 155 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 IFI44LQ53G44 452 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 FASTKD1Q53R41 847 aaKnown RBP2.18□□□□□ -2.06
COPS3-213ENST00000577210 C1orf189Q5VU69 101 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 AGAP6Q5VW22 663 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 PRAMEF8Q5VWM4 474 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 SLC27A4Q6P1M0 643 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 ZNF613Q6PF04 617 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 BHLHB9Q6PI77 547 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 DHRS11Q6UWP2 260 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 BTNL8Q6UX41 500 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 NHLRC1Q6VVB1 395 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 C3P1Q6ZMU1 363 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 KIF6Q6ZMV9 814 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 CATSPER4Q7RTX7 472 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 PTAR1Q7Z6K3 402 aaPredicted RBP2.18□□□□□ -2.06
COPS3-213ENST00000577210 AQP12AQ8IXF9 295 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 KLHDC8AQ8IYD2 350 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 SLC22A15Q8IZD6 547 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 DCLK2Q8N568 766 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 AMER3Q8N944 861 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 CLEC1AQ8NC01 280 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 BEST4Q8NFU0 473 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 ZNF519Q8TB69 540 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 TAF4BQ92750 862 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 FAM46BQ96A09 425 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 ULK4Q96C45 1275 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 C5orf30Q96GV9 206 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 PRAC1Q96KF2 57 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 ZNF560Q96MR9 790 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 PCDHB18PQ96TA0 734 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 CCDC3Q9BQI4 270 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 ZNF559Q9BR84 538 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 LRRC2Q9BYS8 371 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 KRT23Q9C075 422 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 UPF3AQ9H1J1 476 aaKnown RBP2.18□□□□□ -2.06
COPS3-213ENST00000577210 ABCG8Q9H221 673 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 CUEDC2Q9H467 287 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 EGLN3Q9H6Z9 239 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 SP140LQ9H930 580 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 AKIRIN1Q9H9L7 192 aaPredicted RBP2.18□□□□□ -2.06
COPS3-213ENST00000577210 SCRT2Q9NQ03 307 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 ANO10Q9NW15 660 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 COMMD8Q9NX08 183 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 TMOD3Q9NYL9 352 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 SPG21Q9NZD8 308 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 NINJ2Q9NZG7 142 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 CACNG5Q9UF02 275 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 HOOK1Q9UJC3 728 aaKnown RBP2.18□□□□□ -2.06
COPS3-213ENST00000577210 SATB2Q9UPW6 733 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 ERVK-19Q9WJR5 959 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 NUDCQ9Y266 331 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 NCKAP1Q9Y2A7 1128 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 RPH3AQ9Y2J0 694 aaPredicted RBP2.18□□□□□ -2.06
COPS3-213ENST00000577210 TDRKHQ9Y2W6 561 aaKnown RBP2.18□□□□□ -2.06
COPS3-213ENST00000577210 STRAPQ9Y3F4 350 aaKnown RBP2.18□□□□□ -2.06
COPS3-213ENST00000577210 PYGO1Q9Y3Y4 419 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 KLK4Q9Y5K2 254 aa2.18□□□□□ -2.06
COPS3-213ENST00000577210 SPAG9O60271 1321 aaKnown RBP2.17□□□□□ -2.06
COPS3-213ENST00000577210 UMODL1Q5DID0 1318 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms