RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 N6AMT1Q9Y5N5 214 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 A0A1W2PQ09 198 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 SLC35F4A4IF30 521 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 EEF1E1O43324 174 aaKnown RBP12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 NUDT14O95848 222 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 CHRNB1P11230 501 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 CSKP41240 450 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 FGFBP1Q14512 234 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 AGTRAPQ6RW13 159 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 MBOAT1Q6ZNC8 495 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 KRT77Q7Z794 578 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 GPR149Q86SP6 731 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 PTRH1Q86Y79 214 aaKnown RBP12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 PLCZ1Q86YW0 608 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 PHYKPLQ8IUZ5 450 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 IGSF8Q969P0 613 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 VMP1Q96GC9 406 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 PIGUQ9H490 435 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 ZFR2Q9UPR6 939 aaKnown RBP12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR1F1O43749 312 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 JRKO75564 520 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 RB1P06400 928 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 PFKLP17858 780 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 GABRR2P28476 465 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 PCBP2Q15366 365 aaKnown RBP eCLIP12.64□□□□□ -0.395e-7■■■■□ 25.7
PCDHGB3-201ENST00000576222 DHRS4L2Q6PKH6 230 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 IQCHQ86VS3 1027 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 NXPE1Q8N323 547 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 PSD4Q8NDX1 1056 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 PPP1R16AQ96I34 528 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 FERD3LQ96RJ6 166 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 UHRF1Q96T88 793 aaPredicted RBP12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 MNTQ99583 582 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 PTPN18Q99952 460 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 YIPF4Q9BSR8 244 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR51B5Q9H339 312 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 UGT2A1Q9Y4X1 527 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 PDCD5O14737 125 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 LYRM1O43325 122 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 GGT2P36268 569 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 ARL4DP49703 201 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 ZNF763Q0D2J5 394 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 C9orf131Q5VYM1 1079 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 RANBP3LQ86VV4 465 aaPredicted RBP12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 LYSMD2Q8IV50 215 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 CLECL1Q8IZS7 167 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 FAM83FQ8NEG4 500 aaPredicted RBP12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 SLC2A11Q9BYW1 496 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 SLC6A15Q9H2J7 730 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 REEP4Q9H6H4 257 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 FARSBQ9NSD9 589 aaKnown RBP12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 ANKRD34BA5PLL1 514 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 H7C2Y5 167 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 SULT1C4O75897 302 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 ALPPP05187 535 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 FADDQ13158 208 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 PKDCCQ504Y2 493 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 TAF8Q7Z7C8 310 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 LHFPL3Q86UP9 236 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 GALNT13Q8IUC8 556 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 NATD1Q8N6N6 113 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 ZMIZ2Q8NF64 920 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 DNASE1L2Q92874 299 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 C12orf66Q96MD2 445 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 NDC1Q9BTX1 674 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 TCF7L1Q9HCS4 588 aa12.64□□□□□ -0.39
PCDHGB3-201ENST00000576222 ARL6IP5O75915 188 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 PRAMEF12O95522 483 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 RHCEP18577 417 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 EDNRBP24530 442 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 NTRK2Q16620 822 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 TBPL2Q6SJ96 375 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 SIMC1Q8NDZ2 872 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 ATP6V1C2Q8NEY4 427 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 RPLP0P6Q8NHW5 317 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 GTF2H4Q92759 462 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 RAB8BQ92930 207 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 RBM38Q9H0Z9 239 aaKnown RBP12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 UPB1Q9UBR1 384 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 MGAT4AQ9UM21 535 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 ADAM23O75077 832 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 CPNE6O95741 557 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 HK1P19367 917 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 GBX2P52951 348 aaPredicted RBP12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 PSMA6P60900 246 aaKnown RBP12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 RIPPLY1Q0D2K3 151 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 NFATC2Q13469 925 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 ZNF234Q14588 700 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 CES4AQ5XG92 561 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 FUT10Q6P4F1 479 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 HSDL2Q6YN16 418 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 POMGNT2Q8NAT1 580 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 GPR150Q8NGU9 434 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 GPR151Q8TDV0 419 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 ARMC5Q96C12 935 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 DUS3LQ96G46 650 aaKnown RBP12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 ZNF583Q96ND8 569 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 TXNRD2Q9NNW7 524 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 ZSCAN32Q9NX65 697 aa12.63□□□□□ -0.39
PCDHGB3-201ENST00000576222 GPRC5BQ9NZH0 403 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms