RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 MTERF1Q99551 399 aaKnown RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 C17orf62Q9BQA9 187 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 AIF1LQ9BQI0 150 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 YIPF2Q9BWQ6 316 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 DPH1Q9BZG8 443 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 B3GNT4Q9C0J1 378 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 SLC6A16Q9GZN6 736 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 DRC3Q9H069 523 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 MYLK2Q9H1R3 596 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 OR51B5Q9H339 312 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 ZNF395Q9H8N7 513 aaPredicted RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 ACTR8Q9H981 624 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 NPHS2Q9NP85 383 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 DMRT3Q9NQL9 472 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 GPRC5BQ9NZH0 403 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 ZFP69BQ9UJL9 534 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 PADI1Q9ULC6 663 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 SRPK3Q9UPE1 567 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 PTRH2Q9Y3E5 179 aaKnown RBP7.49□□□□□ -1.21
CCDC40-215ENST00000576033 TIMM22Q9Y584 194 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 ANGPTL3Q9Y5C1 460 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 AP1M2Q9Y6Q5 423 aa7.49□□□□□ -1.21
CCDC40-215ENST00000576033 IGHV3-20A0A0C4DH32 117 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 MAGEB17A8MXT2 336 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 FAM227AF5H4B4 570 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 TGFBR3LH3BV60 316 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 ERI3O43414 337 aaKnown RBP7.48□□□□□ -1.21
CCDC40-215ENST00000576033 ITM2AO43736 263 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 SRPX2O60687 465 aaPredicted RBP7.48□□□□□ -1.21
CCDC40-215ENST00000576033 LYPLA1O75608 230 aaPredicted RBP7.48□□□□□ -1.21
CCDC40-215ENST00000576033 DCTN3O75935 186 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 DNAJC8O75937 253 aaPredicted RBP7.48□□□□□ -1.21
CCDC40-215ENST00000576033 SUPT7LO94864 414 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 UBOX5O94941 541 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 SNUPNO95149 360 aaKnown RBP7.48□□□□□ -1.21
CCDC40-215ENST00000576033 GBAP04062 536 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 CELA2AP08217 269 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 SLC35G6P0C7Q6 338 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 CCNYL3P0C7X3 344 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 MYL2P10916 166 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 PTPN4P29074 926 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 SERPINB3P29508 390 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 GRK3P35626 688 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 SERPINB5P36952 375 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 SLC1A6P48664 564 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 ST13P50502 369 aaKnown RBP7.48□□□□□ -1.21
CCDC40-215ENST00000576033 CCNG1P51959 295 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 PLA2G16P53816 162 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 NAGLUP54802 743 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 ABCE1P61221 599 aaKnown RBP7.48□□□□□ -1.21
CCDC40-215ENST00000576033 HERVK_113P63132 956 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 CLCQ05315 142 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 KLC1Q07866 573 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 VAC14Q08AM6 782 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 RAPSNQ13702 412 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 ATP1A4Q13733 1029 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 E2F2Q14209 437 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 ZRSR2Q15696 482 aaKnown RBP7.48□□□□□ -1.21
CCDC40-215ENST00000576033 MUM1Q2TAK8 710 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 DEFB109BQ30KR1 87 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 LIPMQ5VYY2 423 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 CLEC6AQ6EIG7 209 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 CCDC121Q6ZUS5 278 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 LANCL3Q6ZV70 420 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 MAVSQ7Z434 540 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 PPP1R32Q7Z5V6 425 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 MMP21Q8N119 569 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 AFAP1L2Q8N4X5 818 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 CDYL2Q8N8U2 506 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 FAM47BQ8NA70 645 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 HUS1BQ8NHY5 278 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 WDR20Q8TBZ3 569 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 PIWIL2Q8TC59 973 aaKnown RBP7.48□□□□□ -1.21
CCDC40-215ENST00000576033 PROKR1Q8TCW9 393 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 AGR3Q8TD06 166 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 ADAMTS17Q8TE56 1095 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 AGAP11Q8TF27 550 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 SREK1Q8WXA9 508 aaKnown RBP7.48□□□□□ -1.21
CCDC40-215ENST00000576033 TSLPQ969D9 159 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 MS4A6EQ96DS6 147 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 PEX11GQ96HA9 241 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 LRFN5Q96NI6 719 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 SARGQ9BW04 601 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 GATA5Q9BWX5 397 aaPredicted RBP7.48□□□□□ -1.21
CCDC40-215ENST00000576033 TMEM120AQ9BXJ8 343 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 ERVK-6Q9BXR3 956 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 MS4A8Q9BY19 250 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 RHBGQ9H310 441 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 ZNF304Q9HCX3 659 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 ENAMQ9NRM1 1142 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 TRPC4Q9UBN4 977 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 TCFL5Q9UL49 500 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 LHX6Q9UPM6 363 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 FARSAQ9Y285 508 aaKnown RBP7.48□□□□□ -1.21
CCDC40-215ENST00000576033 FIS1Q9Y3D6 152 aa7.48□□□□□ -1.21
CCDC40-215ENST00000576033 LRIT2A6NDA9 550 aa7.47□□□□□ -1.21
CCDC40-215ENST00000576033 ARGFXA6NJG6 315 aa7.47□□□□□ -1.21
CCDC40-215ENST00000576033 WASHC1A8K0Z3 465 aa7.47□□□□□ -1.21
CCDC40-215ENST00000576033 C9J4A7 227 aa7.47□□□□□ -1.21
CCDC40-215ENST00000576033 K7EM74 188 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms