RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 CCNB2O95067 398 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 SNX4O95219 450 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 APOA1P02647 267 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 RBBP4Q09028 425 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 TIMM50Q3ZCQ8 353 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 CCDC190Q86UF4 302 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 CPXM2Q8N436 756 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 LILRA3Q8N6C8 439 aaPredicted RBP16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 OR5AK3PQ8NH89 298 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 GOT1L1Q8NHS2 421 aaPredicted RBP16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 GEMIN6Q8WXD5 167 aaKnown RBP16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 ZNF486Q96H40 463 aaPredicted RBP16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 YME1L1Q96TA2 773 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 SDHCQ99643 169 aaPredicted RBP16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 TMEM121BQ9BXQ6 578 aaPredicted RBP16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 FAM83DQ9H4H8 585 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 C14orf119Q9NWQ9 140 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 FBXL12Q9NXK8 326 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 HS3ST2Q9Y278 367 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 MAP4K5Q9Y4K4 846 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 INSL5Q9Y5Q6 135 aa16.51■□□□□ 0.23
TOM1L1-221ENST00000575882 LOC110117498-PIK3R3F6TDL0 507 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 ARHGAP33O14559 1287 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 CTDSP2O14595 271 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 POP4O95707 220 aaKnown RBP16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 IMPA1P29218 277 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 HLA-FP30511 346 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 BMPR1AP36894 532 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 XCR1P46094 333 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 CDK6Q00534 326 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 IFITM2Q01629 132 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 ZNF763Q0D2J5 394 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 DOC2BQ14184 412 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 ELOAQ14241 798 aaKnown RBP16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 TOR1AIP1Q5JTV8 583 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 HTR3DQ70Z44 454 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 HSD11B1LQ7Z5J1 315 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 TMPRSS11BQ86T26 416 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 ATCAYQ86WG3 371 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 AQP11Q8NBQ7 271 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 IL17RDQ8NFM7 739 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 WDR36Q8NI36 951 aaKnown RBP16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 PIK3R3Q92569 461 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 CXorf40BQ96DE9 158 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 CEP19Q96LK0 163 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 PKP4Q99569 1192 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 TSEN34Q9BSV6 310 aaKnown RBP16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 EMILIN2Q9BXX0 1053 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 MOV10Q9HCE1 1003 aaKnown RBP16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 TRIM39Q9HCM9 518 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 CCRL2O00421 344 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 TSPAN6O43657 245 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 AP2A2O94973 939 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 GADD45GO95257 159 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 CATP04040 527 aaKnown RBP16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 LIMS1P48059 325 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 MC1RQ01726 317 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 C19orf48Q6RUI8 117 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 PTCHD4Q6ZW05 846 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 CCDC80Q76M96 950 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 RNF130Q86XS8 419 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 OXR1Q8N573 874 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 CHAC2Q8WUX2 184 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 NEIL2Q969S2 332 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 TMEM159Q96B96 161 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 MAPKAP1Q9BPZ7 522 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 TMEM38AQ9H6F2 299 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 MRPL17Q9NRX2 175 aaKnown RBP16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 C1GALT1Q9NS00 363 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 ERVK13-1Q9NX77 482 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 RHCGQ9UBD6 479 aa16.5■□□□□ 0.23
TOM1L1-221ENST00000575882 CCNKO75909 580 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 SOD2P04179 222 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 CBLP22681 906 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 TCEA1P23193 301 aaKnown RBP16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 CHI3L1P36222 383 aaPredicted RBP16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 EEF1A2Q05639 463 aaKnown RBP16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 SSX1Q16384 188 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 RSBN1Q5VWQ0 802 aaPredicted RBP16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 MED27Q6P2C8 311 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 Q6ZVL8 140 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 Q6ZVU0 165 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 RAVER1Q8IY67 606 aaKnown RBP16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 OR56A3Q8NH54 315 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 SLC30A2Q9BRI3 323 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 RMI1Q9H9A7 625 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 NEK6Q9HC98 313 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 CLN6Q9NWW5 311 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 CNOT2Q9NZN8 540 aaKnown RBP16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 SH3D21A4FU49 640 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 SAP18O00422 153 aaKnown RBP16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 S100A1P23297 94 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 CHMP24386 653 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 POU1F1P28069 291 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 GABRR2P28476 465 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 CNR2P34972 360 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 ETV3P41162 512 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 SLC15A1P46059 708 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 DGKEP52429 567 aa16.49■□□□□ 0.23
TOM1L1-221ENST00000575882 COPZ1P61923 177 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms