RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 OVCH1Q7RTY7 1134 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 VASH2Q86V25 355 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 PDSS2Q86YH6 399 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 KIRREL3Q8IZU9 778 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 ARFGAP2Q8N6H7 521 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 GBP7Q8N8V2 638 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-217ENST00000575711 KDF1Q8NAX2 398 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-217ENST00000575711 AGR3Q8TD06 166 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 SERINC2Q96SA4 455 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 HBEGFQ99075 208 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 TBCDQ9BTW9 1192 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 GPR87Q9BY21 358 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 ILKAPQ9H0C8 392 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-217ENST00000575711 CLK4Q9HAZ1 481 aaKnown RBP13.25□□□□□ -0.29
RPAIN-217ENST00000575711 SLC22A11Q9NSA0 550 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 AHSPQ9NZD4 102 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 HCN3Q9P1Z3 774 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 TRPC4Q9UBN4 977 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 ZNF282Q9UDV7 671 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-217ENST00000575711 KCND3Q9UK17 655 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 SLC12A4Q9UP95 1085 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 FARSAQ9Y285 508 aaKnown RBP13.25□□□□□ -0.29
RPAIN-217ENST00000575711 PADI2Q9Y2J8 665 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 RAP2CQ9Y3L5 183 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 TRAF6Q9Y4K3 522 aa13.25□□□□□ -0.29
RPAIN-217ENST00000575711 SERTM1A2A2V5 107 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 RTCAO00442 366 aaKnown RBP13.24□□□□□ -0.29
RPAIN-217ENST00000575711 PLPP1O14494 284 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 KLF11O14901 512 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 B3GALT2O43825 422 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 ETHE1O95571 254 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 LIFP15018 202 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 MTTPP55157 894 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 MAT1AQ00266 395 aaKnown RBP13.24□□□□□ -0.29
RPAIN-217ENST00000575711 BROXQ5VW32 411 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 OR4C11Q6IEV9 310 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 MRPL14Q6P1L8 145 aaKnown RBP13.24□□□□□ -0.29
RPAIN-217ENST00000575711 SCIMPQ6UWF3 145 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 ATG14Q6ZNE5 492 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 UBE3DQ7Z6J8 389 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 SPACA3Q8IXA5 215 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 ENDOVQ8N8Q3 282 aaKnown RBP13.24□□□□□ -0.29
RPAIN-217ENST00000575711 AMER3Q8N944 861 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 OR51Q1Q8NH59 317 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 LRRC8CQ8TDW0 803 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 QRFPRQ96P65 431 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 NPLQ9BXD5 320 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-217ENST00000575711 SLC26A1Q9H2B4 701 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 ZNF395Q9H8N7 513 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-217ENST00000575711 MKKSQ9NPJ1 570 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-217ENST00000575711 PRDM7Q9NQW5 492 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 THAP1Q9NVV9 213 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 VPS29Q9UBQ0 182 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 CTSFQ9UBX1 484 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 ZDHHC2Q9UIJ5 367 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 NXT1Q9UKK6 140 aaKnown RBP13.24□□□□□ -0.29
RPAIN-217ENST00000575711 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-217ENST00000575711 PCDHGA6Q9Y5G7 932 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 SPTBP11277 2137 aa13.24□□□□□ -0.29
RPAIN-217ENST00000575711 TMEM233B4DJY2 109 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 TAF4O00268 1085 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 SLC28A1O00337 649 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 TERTO14746 1132 aaKnown RBP13.23□□□□□ -0.29
RPAIN-217ENST00000575711 SCELO95171 688 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 HIST1H1TP22492 207 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-217ENST00000575711 F8A1P23610 371 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 ATP5A1P25705 553 aaKnown RBP13.23□□□□□ -0.29
RPAIN-217ENST00000575711 CERS1P27544 350 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 PTPN4P29074 926 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 OLR1P78380 273 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 HMGCS1Q01581 520 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 SYT16Q17RD7 645 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 RNF165Q6ZSG1 346 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 TRIM46Q7Z4K8 759 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 NUDT13Q86X67 352 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 DDIASQ8IXT1 998 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 ZNF781Q8N8C0 355 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 OR5T3Q8NGG3 340 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 TWIST2Q8WVJ9 160 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 ZNF75CPQ92670 426 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-217ENST00000575711 MIEF2Q96C03 454 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 CCNL2Q96S94 520 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-217ENST00000575711 SORT1Q99523 831 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 ACPTQ9BZG2 426 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 C20orf27Q9GZN8 174 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 WDR54Q9H977 334 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 C14orf105Q9NVL8 296 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 DNAJC15Q9Y5T4 150 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 AKAP13Q12802 2813 aa13.23□□□□□ -0.29
RPAIN-217ENST00000575711 ASPMQ8IZT6 3477 aa13.22□□□□□ -0.29
RPAIN-217ENST00000575711 IGLV3-12A0A075B6K2 115 aa13.22□□□□□ -0.29
RPAIN-217ENST00000575711 VSTM2BA6NLU5 285 aa13.22□□□□□ -0.29
RPAIN-217ENST00000575711 PSMD12O00232 456 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-217ENST00000575711 CHST10O43529 356 aa13.22□□□□□ -0.29
RPAIN-217ENST00000575711 RGS14O43566 566 aa13.22□□□□□ -0.29
RPAIN-217ENST00000575711 SNNO75324 88 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-217ENST00000575711 ZGLP1P0C6A0 271 aa13.22□□□□□ -0.29
RPAIN-217ENST00000575711 IL10P22301 178 aa13.22□□□□□ -0.29
RPAIN-217ENST00000575711 FOLR3P41439 243 aa13.22□□□□□ -0.29
RPAIN-217ENST00000575711 XCR1P46094 333 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms