RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 HNRNPH1P31943 449 aaKnown RBP12.52□□□□□ -0.41
RPAIN-216ENST00000575599 CRHR1P34998 444 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 EFNA3P52797 238 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 STXBP1P61764 594 aaKnown RBP12.52□□□□□ -0.41
RPAIN-216ENST00000575599 AIMP2Q13155 320 aaKnown RBP12.52□□□□□ -0.41
RPAIN-216ENST00000575599 LAPTM5Q13571 262 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 TBCCQ15814 346 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 HIST2H2ACQ16777 129 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-216ENST00000575599 HIST2H2AA3Q6FI13 130 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 NIPAL1Q6NVV3 410 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 VN1R5Q7Z5H4 357 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 PARP9Q8IXQ6 854 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 BANPQ8N9N5 519 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 METTL21AQ8WXB1 218 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 PHF21BQ96EK2 531 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 WDR34Q96EX3 536 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 PAIP2Q9BPZ3 127 aaKnown RBP12.52□□□□□ -0.41
RPAIN-216ENST00000575599 PITHD1Q9GZP4 211 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-216ENST00000575599 VN1R1Q9GZP7 353 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 AICDAQ9GZX7 198 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 NT5DC2Q9H857 520 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 ZNF160Q9HCG1 818 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 COPG2Q9UBF2 871 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 ZNF451Q9Y4E5 1061 aa12.52□□□□□ -0.41
RPAIN-216ENST00000575599 NSG1A0A0A6YYJ2 146 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 OR2W5A6NFC9 320 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 POLR3GO15318 223 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-216ENST00000575599 TM9SF1O15321 606 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 ERI3O43414 337 aaKnown RBP12.51□□□□□ -0.41
RPAIN-216ENST00000575599 CHST10O43529 356 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 CLEC3AO75596 197 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 HPP00738 406 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 C8orf89P0DMQ9 161 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 COX6A1P12074 109 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 PLA2G2AP14555 144 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 CREB1P16220 341 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 EEF1DP29692 281 aaKnown RBP12.51□□□□□ -0.41
RPAIN-216ENST00000575599 ARL1P40616 181 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-216ENST00000575599 BTN3A2P78410 334 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 KLRB1Q12918 225 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 GTF2H2Q13888 395 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 MYBPC3Q14896 1274 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 PCBP2Q15366 365 aaKnown RBP eCLIP12.51□□□□□ -0.41
RPAIN-216ENST00000575599 HHATQ5VTY9 493 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 IRAK1BP1Q5VVH5 260 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 GTF2H2CQ6P1K8 395 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 MED27Q6P2C8 311 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 LANCL3Q6ZV70 420 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 GOLGA7Q7Z5G4 137 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 TEX19Q8NA77 164 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 MGARPQ8TDB4 240 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 DYDC1Q8WWB3 177 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 GAL3ST3Q96A11 431 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 MS4A6EQ96DS6 147 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 FAR2Q96K12 515 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 MRPL57Q9BQC6 102 aaKnown RBP12.51□□□□□ -0.41
RPAIN-216ENST00000575599 TRIM4Q9C037 500 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 REXO4Q9GZR2 422 aaKnown RBP12.51□□□□□ -0.41
RPAIN-216ENST00000575599 MRPL46Q9H2W6 279 aaKnown RBP12.51□□□□□ -0.41
RPAIN-216ENST00000575599 RHBGQ9H310 441 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 ACTR8Q9H981 624 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 MLXIPLQ9NP71 852 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 MKS1Q9NXB0 559 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 MID2Q9UJV3 735 aa12.51□□□□□ -0.41
RPAIN-216ENST00000575599 ZNF490Q9ULM2 529 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-216ENST00000575599 TNPO3Q9Y5L0 923 aaKnown RBP12.51□□□□□ -0.41
RPAIN-216ENST00000575599 LRIT2A6NDA9 550 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 PYCARD-AS1I3L0S3 204 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 E2F3O00716 465 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 SUV39H1O43463 412 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 SH3BGRLO75368 114 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 WFS1O76024 890 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 ALPPP05187 535 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 FHP07954 510 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 NEFHP12036 1026 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 PLA2G16P53816 162 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 DDX39BQ13838 428 aaKnown RBP12.5□□□□□ -0.41
RPAIN-216ENST00000575599 CCDC153Q494R4 210 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 VWA5B1Q5TIE3 1220 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 GRHL2Q6ISB3 625 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 TRIM40Q6P9F5 258 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 ATG14Q6ZNE5 492 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 NDUFAF7Q7L592 441 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 TCP10LQ8TDR4 215 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 SREK1Q8WXA9 508 aaKnown RBP12.5□□□□□ -0.41
RPAIN-216ENST00000575599 UBE2E3Q969T4 207 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 TBC1D20Q96BZ9 403 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 THOC3Q96J01 351 aaKnown RBP12.5□□□□□ -0.41
RPAIN-216ENST00000575599 SEC16BQ96JE7 1060 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 OR1F2PQ96R84 312 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 SMAD5Q99717 465 aaKnown RBP12.5□□□□□ -0.41
RPAIN-216ENST00000575599 IPPKQ9H8X2 491 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 ANAPC2Q9UJX6 822 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 TMCO1Q9UM00 188 aa12.5□□□□□ -0.41
RPAIN-216ENST00000575599 TLN1Q9Y490 2541 aaKnown RBP12.49□□□□□ -0.41
RPAIN-216ENST00000575599 IGHV1-45A0A0A0MS14 117 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 IGHV3-20A0A0C4DH32 117 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 PSMD12O00232 456 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-216ENST00000575599 PCDH17O14917 1159 aa12.49□□□□□ -0.41
RPAIN-216ENST00000575599 TYROBPO43914 113 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms