RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 SLC17A9Q9BYT1 436 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 RHBGQ9H310 441 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 PELI2Q9HAT8 420 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 SLAMF7Q9NQ25 335 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 LHX9Q9NQ69 397 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 PDP1Q9P0J1 537 aaPredicted RBP22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 CORO2BQ9UQ03 480 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 TSC22D4Q9Y3Q8 395 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 SAMHD1Q9Y3Z3 626 aaKnown RBP22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 GMEB1Q9Y692 573 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 CRHBPP24387 322 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 BSGP35613 385 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 CCR8P51685 355 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 AMER3Q8N944 861 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 UCN3Q969E3 161 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 CD93Q9NPY3 652 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 TAS2R9Q9NYW1 312 aa22.6■■□□□ 1.21
NPLOC4-217ENST00000574897 IGKV1-8A0A0C4DH67 115 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 SLC31A1O15431 190 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 RNGTTO60942 597 aaKnown RBP22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 ADAM23O75077 832 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 ALDH9A1P49189 494 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 ESRRGP62508 458 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 RPS21P63220 83 aaKnown RBP22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 REEP5Q00765 189 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 EPS8Q12929 822 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 SIM2Q14190 667 aaPredicted RBP22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 ADCK2Q7Z695 626 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 ABHD11Q8NFV4 315 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 OR52N2Q8NGI0 321 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 SPATA9Q9BWV2 254 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 YTHDF1Q9BYJ9 559 aaKnown RBP22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 ASPSCR1Q9BZE9 553 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 RIBC2Q9H4K1 309 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 BAG5Q9UL15 447 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 PRUNE2Q8WUY3 3088 aa22.59■■□□□ 1.21
NPLOC4-217ENST00000574897 TMX2-CTNND1H3BSU7 103 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 SUV39H1O43463 412 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 OR1F1O43749 312 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 EPHA2P29317 976 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 CHI3L1P36222 383 aaPredicted RBP22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 ISL1P61371 349 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 RAPSNQ13702 412 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 TMEM259Q4ZIN3 620 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 C6orf141Q5SZD1 244 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 FAM124AQ86V42 546 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 POP5Q969H6 163 aaKnown RBP22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 CAMK1GQ96NX5 476 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 NAA50Q9GZZ1 169 aaKnown RBP22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 S1PR5Q9H228 398 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 CXorf36Q9H7Y0 433 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 C1GALT1Q9NS00 363 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 MSRAQ9UJ68 235 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 ACSL5Q9ULC5 683 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 GPSM3Q9Y4H4 160 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 TRMUO75648 421 aaKnown RBP22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 HOXB3P14651 431 aaPredicted RBP22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 DNAJA1P31689 397 aaKnown RBP22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 MAPK12P53778 367 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 ADPRHP54922 357 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 PPP2CBP62714 309 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 PPP2CAP67775 309 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 ZNF691Q5VV52 312 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 CNIH3Q8TBE1 160 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 JPH3Q8WXH2 748 aaPredicted RBP22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 TM4SF18Q96CE8 201 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 ISOC1Q96CN7 298 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 MACROD1Q9BQ69 325 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 GABARAPL1Q9H0R8 117 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 CXorf21Q9HAI6 301 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 ZNF451Q9Y4E5 1061 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 SNX11Q9Y5W9 270 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 SNX8Q9Y5X2 465 aa22.58■■□□□ 1.21
NPLOC4-217ENST00000574897 TBC1D3DA0A087WVF3 549 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 TBC1D3IA0A087WXS9 549 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 TBC1D3EA0A087X179 549 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 TBC1D3KA0A087X1G2 549 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 TBC1D3FA6NER0 549 aaPredicted RBP22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 TBC1D3LB9A6J9 549 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 PLRG1O43660 514 aaKnown RBP22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 SERPIND1P05546 499 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 TBC1D3HP0C7X1 549 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 FPR1P21462 350 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 OR1E2P47887 323 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 RAD23AP54725 363 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 ITGA1P56199 1179 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 SCARB2Q14108 478 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 GCNT6Q5T4J0 391 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 TBC1D3GQ6DHY5 549 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 TBC1D3CQ6IPX1 549 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 ZNF773Q6PK81 442 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 TBC1D3Q8IZP1 549 aaPredicted RBP22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 SPPL2AQ8TCT8 520 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 TBC1D20Q96BZ9 403 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 BTBD1Q9H0C5 482 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 PRDM8Q9NQV8 689 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 ADPRHL2Q9NX46 363 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 THUMPD1Q9NXG2 353 aaKnown RBP22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 SPATA7Q9P0W8 599 aa22.57■■□□□ 1.2
NPLOC4-217ENST00000574897 ORC6Q9Y5N6 252 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms