RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.06□□□□□ -0.8
LITAF-216ENST00000574848 CMTM5Q96DZ9 223 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 LINGO1Q96FE5 620 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 ATOH8Q96SQ7 321 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 MMADHCQ9H3L0 296 aaPredicted RBP10.06□□□□□ -0.8
LITAF-216ENST00000574848 SEMA3GQ9NS98 782 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 NUDT4Q9NZJ9 180 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 STOX2Q9P2F5 926 aaPredicted RBP10.06□□□□□ -0.8
LITAF-216ENST00000574848 TAGLN3Q9UI15 199 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 TNPO3Q9Y5L0 923 aaKnown RBP10.06□□□□□ -0.8
LITAF-216ENST00000574848 HS3ST3B1Q9Y662 390 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 PTPN13Q12923 2485 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 TXNDC9O14530 226 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 GYG2O15488 501 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 MLYCDO95822 493 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 CHRNGP07510 517 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 NCF2P19878 526 aaPredicted RBP10.05□□□□□ -0.8
LITAF-216ENST00000574848 CCND1P24385 295 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 OR1D4P47884 311 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 TBPL1P62380 186 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 CDC16Q13042 620 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 AIMP2Q13155 320 aaKnown RBP10.05□□□□□ -0.8
LITAF-216ENST00000574848 DSG2Q14126 1118 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 IGFBP7Q16270 282 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 NADK2Q4G0N4 442 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 SLC6A19Q695T7 634 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 JMJD6Q6NYC1 403 aaPredicted RBP10.05□□□□□ -0.8
LITAF-216ENST00000574848 CUZD1Q86UP6 607 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 GPSM1Q86YR5 675 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 GALNT16Q8N428 558 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 DTWD1Q8N5C7 304 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 CSNK1A1LQ8N752 337 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 RBMXL3Q8N7X1 1067 aaKnown RBP10.05□□□□□ -0.8
LITAF-216ENST00000574848 PTGR2Q8N8N7 351 aaPredicted RBP10.05□□□□□ -0.8
LITAF-216ENST00000574848 Q8NA96 180 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 EEF1AKMT1Q8WVE0 214 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 EXT2Q93063 718 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 PNPLA2Q96AD5 504 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 MCUR1Q96AQ8 359 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 PHF21BQ96EK2 531 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 PTCD3Q96EY7 689 aaKnown RBP10.05□□□□□ -0.8
LITAF-216ENST00000574848 CCDC138Q96M89 665 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 EBF4Q9BQW3 602 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 BTBD10Q9BSF8 475 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 SGPP1Q9BX95 441 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 UNKQ9C0B0 810 aaKnown RBP10.05□□□□□ -0.8
LITAF-216ENST00000574848 PCBD2Q9H0N5 130 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 ZNF552Q9H707 407 aaPredicted RBP10.05□□□□□ -0.8
LITAF-216ENST00000574848 ZNF304Q9HCX3 659 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 CCDC177Q9NQR7 707 aaPredicted RBP10.05□□□□□ -0.8
LITAF-216ENST00000574848 C14orf105Q9NVL8 296 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 FBXL4Q9UKA2 621 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 ADAMTS6Q9UKP5 1117 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 PDE10AQ9Y233 779 aa10.05□□□□□ -0.8
LITAF-216ENST00000574848 RUVBL1Q9Y265 456 aaKnown RBP10.05□□□□□ -0.8
LITAF-216ENST00000574848 SHANK1Q9Y566 2161 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 KCNE1BA0A087WTH5 132 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 NPEPPSL1A6NEC2 478 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 ZNF195O14628 629 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 HAT1O14929 419 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 P2RX6O15547 441 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 KLK8O60259 260 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 CRCPO75575 148 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 CBX6O95503 412 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 CHEK2O96017 543 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 ALPPP05187 535 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 FBLP22087 321 aaKnown RBP10.04□□□□□ -0.8
LITAF-216ENST00000574848 ARRB2P32121 409 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 PGGT1BP53609 377 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 MLLT10P55197 1068 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 AP1S2P56377 157 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 MXRA7P84157 204 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 LCP2Q13094 533 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 FAM53BQ14153 422 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 OR4D1Q15615 310 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 TSNQ15631 228 aaKnown RBP10.04□□□□□ -0.8
LITAF-216ENST00000574848 PFKFB4Q16877 469 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 HKDC1Q2TB90 917 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 COLEC12Q5KU26 742 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 PRAMEF13Q5VWM6 474 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 METTL2BQ6P1Q9 378 aaKnown RBP10.04□□□□□ -0.8
LITAF-216ENST00000574848 KIRREL2Q6UWL6 708 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 AMER3Q8N944 861 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 CEP70Q8NHQ1 597 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 STT3BQ8TCJ2 826 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 AGR3Q8TD06 166 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 MCOLN3Q8TDD5 553 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 RERGQ96A58 199 aaPredicted RBP10.04□□□□□ -0.8
LITAF-216ENST00000574848 VPS50Q96JG6 964 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 CCT7Q99832 543 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 CCDC106Q9BWC9 280 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 C1QTNF3Q9BXJ4 246 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 TGIF2Q9GZN2 237 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 GSTO2Q9H4Y5 243 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 PARVBQ9HBI1 364 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 ATP13A2Q9NQ11 1180 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 TMEM184CQ9NVA4 438 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 CUEDC1Q9NWM3 386 aaPredicted RBP10.04□□□□□ -0.8
LITAF-216ENST00000574848 NDE1Q9NXR1 346 aa10.04□□□□□ -0.8
LITAF-216ENST00000574848 CD274Q9NZQ7 290 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms