RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CELF2-AS1Q8N7Q2 184 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 Q8NA96 180 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 MFSD9Q8NBP5 474 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 OR51Q1Q8NH59 317 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 DNAJB14Q8TBM8 379 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 FBXO25Q8TCJ0 367 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 ANKRD49Q8WVL7 239 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 SLC5A11Q8WWX8 675 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 METTL21AQ8WXB1 218 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 NEIL2Q969S2 332 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 C8orf44Q96CB5 159 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 TSPAN17Q96FV3 270 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 FANCD2OSQ96PS1 177 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 OR4K3Q96R72 315 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 CYTH2Q99418 400 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 CPNE1Q99829 537 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 EGFL8Q99944 293 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 MESP1Q9BRJ9 268 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 SARGQ9BW04 601 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 CAB39LQ9H9S4 337 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 ZNF160Q9HCG1 818 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 ANKHQ9HCJ1 492 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 SSU72Q9NP77 194 aaKnown RBP7.03□□□□□ -1.28
NUP88-205ENST00000572809 LUZP4Q9P127 313 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 SLC22A14Q9Y267 594 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 B3GNT3Q9Y2A9 372 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 OARD1Q9Y530 152 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 SLC22A7Q9Y694 548 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 KCNE2Q9Y6J6 123 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 MDC1Q14676 2089 aaKnown RBP7.03□□□□□ -1.28
NUP88-205ENST00000572809 MYO18BQ8IUG5 2567 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 LOC102723996A0A087X1L8 192 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 IGHV1-45A0A0A0MS14 117 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 TRBC2A0A5B9 178 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 NPEPPSL1A6NEC2 478 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 H2AFYO75367 372 aaKnown RBP7.02□□□□□ -1.29
NUP88-205ENST00000572809 JRKO75564 520 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 URI1O94763 535 aaPredicted RBP7.02□□□□□ -1.29
NUP88-205ENST00000572809 KLHL18O94889 574 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 CCDC166P0CW27 439 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 COX6A1P12074 109 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 ICAM2P13598 275 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 STMN1P16949 149 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 IL1RNP18510 177 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 GP5P40197 560 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 GDF5P43026 501 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 SLC7A5Q01650 507 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 CKAP4Q07065 602 aaKnown RBP7.02□□□□□ -1.29
NUP88-205ENST00000572809 HERC3Q15034 1050 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 RBBP5Q15291 538 aaKnown RBP7.02□□□□□ -1.29
NUP88-205ENST00000572809 TGFBIQ15582 683 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 TSNQ15631 228 aaKnown RBP7.02□□□□□ -1.29
NUP88-205ENST00000572809 ZBTB37Q5TC79 503 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 MFSD4BQ5TF39 518 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 FDX2Q6P4F2 183 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 TMEM205Q6UW68 189 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 ZDHHC24Q6UX98 284 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 ISLR2Q6UXK2 745 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 Q6ZS92 163 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 FRA10AC1Q70Z53 315 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 PRSS41Q7RTY9 318 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 ADAMTSL2Q86TH1 951 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 ZC3H7AQ8IWR0 971 aaKnown RBP7.02□□□□□ -1.29
NUP88-205ENST00000572809 IQCKQ8N0W5 287 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 SPATA6LQ8N4H0 392 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 CISD2Q8N5K1 135 aaKnown RBP7.02□□□□□ -1.29
NUP88-205ENST00000572809 PPM1NQ8N819 430 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 ZNF740Q8NDX6 193 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 ZCCHC10Q8TBK6 192 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 RHBDF1Q96CC6 855 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 SNRNP40Q96DI7 357 aaKnown RBP7.02□□□□□ -1.29
NUP88-205ENST00000572809 MOCOSQ96EN8 888 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 DHRS1Q96LJ7 313 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 TSNARE1Q96NA8 513 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 LMF1Q96S06 567 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 GPR22Q99680 433 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 RBBP8Q99708 897 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 AIF1LQ9BQI0 150 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 LRRC1Q9BTT6 524 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 CAPS2Q9BXY5 557 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 UNKQ9C0B0 810 aaKnown RBP7.02□□□□□ -1.29
NUP88-205ENST00000572809 DERL2Q9GZP9 239 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 ILKAPQ9H0C8 392 aaPredicted RBP7.02□□□□□ -1.29
NUP88-205ENST00000572809 ZNF700Q9H0M5 742 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 EPS8L2Q9H6S3 715 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 PELI2Q9HAT8 420 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 LRRC4CQ9HCJ2 640 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 HCN3Q9P1Z3 774 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 ZFP69BQ9UJL9 534 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 NAALAD2Q9Y3Q0 740 aa7.02□□□□□ -1.29
NUP88-205ENST00000572809 COPG1Q9Y678 874 aaKnown RBP7.02□□□□□ -1.29
NUP88-205ENST00000572809 BSNQ9UPA5 3926 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 A0A1W2PQ72 361 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 OR2W5A6NFC9 320 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 URADA6NGE7 173 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 NCF1BA6NI72 391 aaPredicted RBP7.01□□□□□ -1.29
NUP88-205ENST00000572809 NCF1CA8MVU1 366 aaPredicted RBP7.01□□□□□ -1.29
NUP88-205ENST00000572809 TCP11X1B4DZS4 312 aa7.01□□□□□ -1.29
NUP88-205ENST00000572809 TAPBPO15533 448 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms