RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 TSFMP43897 325 aaKnown RBP16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 SLC26A5P58743 744 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 EXT1Q16394 746 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 PAGE2BQ5JRK9 111 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 TRIM40Q6P9F5 258 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 MYLK4Q86YV6 388 aaPredicted RBP16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 PLD6Q8N2A8 252 aaKnown RBP16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 CEP112Q8N8E3 955 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 FAM47BQ8NA70 645 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 SLC44A1Q8WWI5 657 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 WDR34Q96EX3 536 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 F2RL3Q96RI0 385 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 PITHD1Q9GZP4 211 aaPredicted RBP16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 TSPYL1Q9H0U9 437 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 NECTIN3Q9NQS3 549 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 AGPAT4Q9NRZ5 378 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 ANKRD10Q9NXR5 420 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 CPSF2Q9P2I0 782 aaKnown RBP16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 COPG2Q9UBF2 871 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 TEKT2Q9UIF3 430 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 NFU1Q9UMS0 254 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 ANGPTL3Q9Y5C1 460 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 IKBKGQ9Y6K9 419 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 NUP210LQ5VU65 1888 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 CLEC18AA5D8T8 446 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 SYCE1LA8MT33 242 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 B3GALT2O43825 422 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 MAN1A2O60476 641 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 SEMA7AO75326 666 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 KLHL2O95198 593 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 CBX6O95503 412 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 RHOXF2BP0C7M4 288 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 CERS1P27544 350 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 GSTM2P28161 218 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 TNFSF10P50591 281 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 SRSF11Q05519 484 aaKnown RBP16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 LAPTM5Q13571 262 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 ACAP2Q15057 778 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 KLC3Q6P597 504 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 CLEC18BQ6UXF7 455 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 QSOX2Q6ZRP7 698 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 CRLF3Q8IUI8 442 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 BEST3Q8N1M1 668 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 KIF2BQ8N4N8 673 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 CLEC18CQ8NCF0 446 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 OR2L5Q8NG80 312 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 M1APQ8TC57 530 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 UBTD2Q8WUN7 234 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 HAS2Q92819 552 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 QRFPRQ96P65 431 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 RHOXF2Q9BQY4 288 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 COPS7BQ9H9Q2 264 aaPredicted RBP16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 MMP25Q9NPA2 562 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 PRDM9Q9NQV7 894 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 ZNF358Q9NW07 568 aa16.69■□□□□ 0.26
CTDNEP1-207ENST00000572043 A0A088AWK7 358 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 TRAV17A0A0B4J275 112 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 BLACEA4D250 179 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 OR5H15A6NDH6 313 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 ANKUB1A6NFN9 424 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 SAP18O00422 153 aaKnown RBP16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 RTCAO00442 366 aaKnown RBP16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 TGFB1P01137 390 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 EPB42P16452 691 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 ZNF10P21506 573 aaPredicted RBP16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 HNRNPFP52597 415 aaKnown RBP16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 DDX39BQ13838 428 aaKnown RBP16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 ELOAQ14241 798 aaKnown RBP16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 SETDB1Q15047 1291 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 TBCCQ15814 346 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 ACER2Q5QJU3 275 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 MED27Q6P2C8 311 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 ABHD17CQ6PCB6 329 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 FAM180AQ6UWF9 173 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 CCDC91Q7Z6B0 441 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 CLNKQ7Z7G1 428 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 RNF175Q8N4F7 328 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 TMEM52Q8NDY8 209 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 RHEBL1Q8TAI7 183 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 SEC16BQ96JE7 1060 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 SCYL1Q96KG9 808 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 GPR78Q96P69 363 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 CSF3RQ99062 836 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 FUT8Q9BYC5 575 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 CLK4Q9HAZ1 481 aaKnown RBP16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 PRTFDC1Q9NRG1 225 aa16.68■□□□□ 0.26
CTDNEP1-207ENST00000572043 A0A087WUV0 522 aaPredicted RBP16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 MYOCOSA0A1B0GUC4 107 aa16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 SIX3O95343 332 aaPredicted RBP16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 MTTPP55157 894 aa16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 RAB38P57729 211 aa16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 ADPRMQ3LIE5 342 aa16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 TAOK1Q7L7X3 1001 aa16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 ARMC2Q8NEN0 867 aa16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 SUN3Q8TAQ9 357 aa16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 ZNF473Q8WTR7 871 aaKnown RBP16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 ZNF354BQ96LW1 612 aa16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 SERINC2Q96SA4 455 aa16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 NPAS2Q99743 824 aa16.67■□□□□ 0.26
CTDNEP1-207ENST00000572043 NPLQ9BXD5 320 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms