RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 C18orf21Q32NC0 220 aaPredicted RBP16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 TOR1AIP1Q5JTV8 583 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 PRAMEF9Q5VWM5 478 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CRYBG3Q68DQ2 2970 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 LRRC70Q7Z2Q7 622 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 AMER2Q8N7J2 671 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 NFAM1Q8NET5 270 aaPredicted RBP16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 OR2L5Q8NG80 312 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 STAG3L4Q8TBR4 150 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 UBTD2Q8WUN7 234 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 RELTQ969Z4 430 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 QRFPRQ96P65 431 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 WWOXQ9NZC7 414 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CLDN16Q9Y5I7 305 aa16.02■□□□□ 0.16
MAP1LC3B-208ENST00000570189 CROCCQ5TZA2 2017 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ASPDHA6ND91 283 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 NCF1BA6NI72 391 aaPredicted RBP16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 A8MUI8 341 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 NCF1CA8MVU1 366 aaPredicted RBP16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 PSMD12O00232 456 aaPredicted RBP16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 B4GALT2O60909 372 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CLDN1O95832 211 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 NCF1P14598 390 aaPredicted RBP16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 EPORP19235 508 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CRABP2P29373 138 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CKAP4Q07065 602 aaKnown RBP16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ZNF766Q5HY98 468 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 VN1R5Q7Z5H4 357 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ISCA2Q86U28 154 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 RELL1Q8IUW5 271 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CTAGE3PQ8IX95 158 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SPATA6LQ8N4H0 392 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 HORMAD2Q8N7B1 307 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ARMC2Q8NEN0 867 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 FBF1Q8TES7 1133 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 FAR2Q96K12 515 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 MAGEB10Q96LZ2 347 aaPredicted RBP16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ATOH8Q96SQ7 321 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 UTP23Q9BRU9 249 aaKnown RBP16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 NMRAL1Q9HBL8 299 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ZDHHC18Q9NUE0 388 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 NUDT4Q9NZJ9 180 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ZNF490Q9ULM2 529 aaPredicted RBP16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 OSGIN2Q9Y236 505 aa16.01■□□□□ 0.15
MAP1LC3B-208ENST00000570189 MYO7BQ6PIF6 2116 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ANKDD1BA6NHY2 528 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ERI3O43414 337 aaKnown RBP16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 KERAO60938 352 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 F10P00742 488 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TRHRP34981 398 aaPredicted RBP16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CD96P40200 585 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 HNF4AP41235 474 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 KCNC1P48547 511 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 HSPA7P48741 367 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 RAB38P57729 211 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 BTG2P78543 158 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 DOC2AQ14183 400 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TRADDQ15628 312 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 PAGE2BQ5JRK9 111 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ABHD17CQ6PCB6 329 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 RPS19BP1Q86WX3 136 aaKnown RBP16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 PPM1NQ8N819 430 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 APCDD1LQ8NCL9 501 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 RHEBL1Q8TAI7 183 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SIGLEC12Q96PQ1 595 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SERINC2Q96SA4 455 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CD244Q9BZW8 370 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 REXO4Q9GZR2 422 aaKnown RBP16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 NECTIN3Q9NQS3 549 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CD274Q9NZQ7 290 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 RNF112Q9ULX5 631 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TSC22D4Q9Y3Q8 395 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CELSR2Q9HCU4 2923 aa16■□□□□ 0.15
MAP1LC3B-208ENST00000570189 GABRR3A8MPY1 467 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 LRRTM2O43300 516 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 NEURL1O76050 574 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 LTA4HP09960 611 aaKnown RBP15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 CD22P20273 847 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 MAOAP21397 527 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SERPINB1P30740 379 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 BTN3A2P78410 334 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 DLG1Q12959 904 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 RUNX2Q13950 521 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 RCN2Q14257 317 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 OR1C1Q15619 314 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 FCRLBQ6BAA4 426 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TRIM40Q6P9F5 258 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TBC1D1Q86TI0 1168 aaPredicted RBP15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ZNF595Q8IYB9 648 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 LAS2Q8IYD9 372 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 C17orf53Q8N3J3 647 aaPredicted RBP15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 TMEM178AQ8NBL3 297 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 SRFBP1Q8NEF9 429 aaKnown RBP15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 B3GNT7Q8NFL0 401 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 THAP3Q8WTV1 239 aaPredicted RBP15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 UBE2E3Q969T4 207 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 FUT8Q9BYC5 575 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 UNKQ9C0B0 810 aaKnown RBP15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 ROGDIQ9GZN7 287 aa15.99■□□□□ 0.15
MAP1LC3B-208ENST00000570189 IGSF5Q9NSI5 407 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms