RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 FAR2Q96K12 515 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 REXO4Q9GZR2 422 aaKnown RBP12.26□□□□□ -0.45
CNOT1-220ENST00000569916 ILKAPQ9H0C8 392 aaPredicted RBP12.26□□□□□ -0.45
CNOT1-220ENST00000569916 EPB41L4BQ9H329 900 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 PTGFRNQ9P2B2 879 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 CPSF2Q9P2I0 782 aaKnown RBP12.26□□□□□ -0.45
CNOT1-220ENST00000569916 XPR1Q9UBH6 696 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 PSMD12O00232 456 aaPredicted RBP12.25□□□□□ -0.45
CNOT1-220ENST00000569916 B4GALT2O60909 372 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 SIX3O95343 332 aaPredicted RBP12.25□□□□□ -0.45
CNOT1-220ENST00000569916 SNRPAP09012 282 aaKnown RBP12.25□□□□□ -0.45
CNOT1-220ENST00000569916 RBP1P09455 135 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 MYBL2P10244 700 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 COL6A2P12110 1019 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 ICAM2P13598 275 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 PLA2G16P53816 162 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 AP2B1P63010 937 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 BTG2P78543 158 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 RUNX2Q13950 521 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 HIST2H2ACQ16777 129 aaPredicted RBP12.25□□□□□ -0.45
CNOT1-220ENST00000569916 TSNAXIP1Q2TAA8 658 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 BTBD16Q32M84 506 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 B3GNTL1Q67FW5 361 aaPredicted RBP12.25□□□□□ -0.45
CNOT1-220ENST00000569916 HIST2H2AA3Q6FI13 130 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 GRHL2Q6ISB3 625 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 MED27Q6P2C8 311 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 TRIM40Q6P9F5 258 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 ABHD17CQ6PCB6 329 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 PAPD4Q6PIY7 484 aaKnown RBP12.25□□□□□ -0.45
CNOT1-220ENST00000569916 ADGRD1Q6QNK2 874 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 GOLGA7Q7Z5G4 137 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 IQCKQ8N0W5 287 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 PTGR2Q8N8N7 351 aaPredicted RBP12.25□□□□□ -0.45
CNOT1-220ENST00000569916 ZNF473Q8WTR7 871 aaKnown RBP12.25□□□□□ -0.45
CNOT1-220ENST00000569916 UBE2E3Q969T4 207 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 LMF1Q96S06 567 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 NPLQ9BXD5 320 aaPredicted RBP12.25□□□□□ -0.45
CNOT1-220ENST00000569916 MS4A8Q9BY19 250 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 PCDHGA10Q9Y5H3 936 aa12.25□□□□□ -0.45
CNOT1-220ENST00000569916 A0A088AWK7 358 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 IGKV3D-11A0A0A0MRZ8 115 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 FAM227AF5H4B4 570 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 E2F3O00716 465 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 PRMT3O60678 531 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 PCNAP12004 261 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 MAOAP21397 527 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 ZNF10P21506 573 aaPredicted RBP12.24□□□□□ -0.45
CNOT1-220ENST00000569916 CERS1P27544 350 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 HPDP32754 393 aaPredicted RBP12.24□□□□□ -0.45
CNOT1-220ENST00000569916 MTTPP55157 894 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 RAB38P57729 211 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 OR4D2P58180 307 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 GTF2H2Q13888 395 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 SLC29A2Q14542 456 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 EXT1Q16394 746 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 TEX35Q5T0J7 233 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 GTF2H2CQ6P1K8 395 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 METTL2BQ6P1Q9 378 aaKnown RBP12.24□□□□□ -0.45
CNOT1-220ENST00000569916 UBE3DQ7Z6J8 389 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 ATCAYQ86WG3 371 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 EFCAB3Q8N7B9 438 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 EIF1ADQ8N9N8 165 aaKnown RBP12.24□□□□□ -0.45
CNOT1-220ENST00000569916 OR7G3Q8NG95 312 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 DNAJB14Q8TBM8 379 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 SNRNP40Q96DI7 357 aaKnown RBP12.24□□□□□ -0.45
CNOT1-220ENST00000569916 SCYL1Q96KG9 808 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 CNDP1Q96KN2 507 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 PTCHD1Q96NR3 888 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 F2RL3Q96RI0 385 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 SERINC2Q96SA4 455 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 LPAR4Q99677 370 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 NECTIN3Q9NQS3 549 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 PRDM9Q9NQV7 894 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 PRDM7Q9NQW5 492 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 ANGPTL3Q9Y5C1 460 aa12.24□□□□□ -0.45
CNOT1-220ENST00000569916 TNPO3Q9Y5L0 923 aaKnown RBP12.24□□□□□ -0.45
CNOT1-220ENST00000569916 TCRBV16S1A1N1A0A5B0 115 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 STX16-NPEPL1H3BU86 382 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 STX16O14662 325 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 B3GALT2O43825 422 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 SBK3P0C264 359 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 TNFRSF8P28908 595 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 EEF1DP29692 281 aaKnown RBP12.23□□□□□ -0.45
CNOT1-220ENST00000569916 SERPINB1P30740 379 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 UQCRFS1P47985 274 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 PIK3CGP48736 1102 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 HNRNPFP52597 415 aaKnown RBP12.23□□□□□ -0.45
CNOT1-220ENST00000569916 SLC26A5P58743 744 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 ZNF169Q14929 603 aaPredicted RBP12.23□□□□□ -0.45
CNOT1-220ENST00000569916 LGSNQ5TDP6 509 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 LIPJQ5W064 366 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 ZNF793Q6ZN11 406 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 TIFABQ6ZNK6 161 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 MYLK4Q86YV6 388 aaPredicted RBP12.23□□□□□ -0.45
CNOT1-220ENST00000569916 SCUBE1Q8IWY4 988 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 RNF175Q8N4F7 328 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 GALNT11Q8NCW6 608 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 TMEM52Q8NDY8 209 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 M1APQ8TC57 530 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 ADAMTS18Q8TE60 1221 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms