RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 TYK2P29597 1187 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 TNFSF10P50591 281 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 OR4D2P58180 307 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 BTG2P78543 158 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 IRF8Q02556 426 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 HIST2H2ACQ16777 129 aaPredicted RBP19.07■□□□□ 0.64
CLK3-225ENST00000569063 ABHD17BQ5VST6 288 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 HIST2H2AA3Q6FI13 130 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 CEP112Q8N8E3 955 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 OR2L5Q8NG80 312 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 PTCHD1Q96NR3 888 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 GPR78Q96P69 363 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 REXO4Q9GZR2 422 aaKnown RBP19.07■□□□□ 0.64
CLK3-225ENST00000569063 PRDM9Q9NQV7 894 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 AGPAT4Q9NRZ5 378 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 PLA2G3Q9NZ20 509 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 OPTCQ9UBM4 332 aa19.07■□□□□ 0.64
CLK3-225ENST00000569063 NBASA2RRP1 2371 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 A0A088AWK7 358 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 IGKV3D-11A0A0A0MRZ8 115 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 FAM227AF5H4B4 570 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 KLK8O60259 260 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 WDPCPO95876 746 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 UQCRHP07919 91 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 ZNF10P21506 573 aaPredicted RBP19.06■□□□□ 0.64
CLK3-225ENST00000569063 MRPL49Q13405 166 aaKnown RBP19.06■□□□□ 0.64
CLK3-225ENST00000569063 RUNX2Q13950 521 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 NR6A1Q15406 480 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 ADNP2Q6IQ32 1131 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 KLC3Q6P597 504 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 OR1N1Q8NGS0 311 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 ISL2Q96A47 359 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 QRFPRQ96P65 431 aa19.06■□□□□ 0.64
CLK3-225ENST00000569063 TRAV17A0A0B4J275 112 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 TCRBV16S1A1N1A0A5B0 115 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 A8MUI8 341 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 INHBAP08476 426 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 EPB42P16452 691 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 MAGEA12P43365 314 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 SERPINB9P50453 376 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 SLC26A5P58743 744 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 ZNF33BQ06732 778 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 NAA30Q147X3 362 aaPredicted RBP19.05■□□□□ 0.64
CLK3-225ENST00000569063 SETDB1Q15047 1291 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 FHL5Q5TD97 284 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 TRIM40Q6P9F5 258 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 LAS2Q8IYD9 372 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 UBE2E3Q969T4 207 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 TRIM44Q96DX7 344 aaPredicted RBP19.05■□□□□ 0.64
CLK3-225ENST00000569063 ZNF354BQ96LW1 612 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 PAFAH2Q99487 392 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 KCNK13Q9HB14 408 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 IKBKGQ9Y6K9 419 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 COL12A1Q99715 3063 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 CPAMD8Q8IZJ3 1885 aa19.05■□□□□ 0.64
CLK3-225ENST00000569063 FLNCQ14315 2725 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 A0A0G2JN53 185 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 B3GALT2O43825 422 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 MAOAP21397 527 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 PLA2G16P53816 162 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 ALDH18A1P54886 795 aaKnown RBP19.04■□□□□ 0.64
CLK3-225ENST00000569063 ACER2Q5QJU3 275 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 MED27Q6P2C8 311 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 ABHD17CQ6PCB6 329 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 ADAMTS18Q8TE60 1221 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 GRHL3Q8TE85 626 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 ZNF473Q8WTR7 871 aaKnown RBP19.04■□□□□ 0.64
CLK3-225ENST00000569063 SERINC2Q96SA4 455 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 VPS11Q9H270 941 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 NECTIN3Q9NQS3 549 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 PRDM7Q9NQW5 492 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 ZNF180Q9UJW8 692 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 MMACHCQ9Y4U1 282 aa19.04■□□□□ 0.64
CLK3-225ENST00000569063 SCN2AQ99250 2005 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 A0A087WUV0 522 aaPredicted RBP19.03■□□□□ 0.64
CLK3-225ENST00000569063 OR5H15A6NDH6 313 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 GFAPP14136 432 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 CNTFP26441 200 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 SERPINB1P30740 379 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 MSH2P43246 934 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 MTTPP55157 894 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 RAB38P57729 211 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 TGM3Q08188 693 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 PCBP2Q15366 365 aaKnown RBP eCLIP19.03■□□□□ 0.64
CLK3-225ENST00000569063 INAQ16352 499 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 PFKFB4Q16877 469 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 EIF2S3LQ2VIR3 472 aaKnown RBP19.03■□□□□ 0.64
CLK3-225ENST00000569063 METTL2BQ6P1Q9 378 aaKnown RBP19.03■□□□□ 0.64
CLK3-225ENST00000569063 TAOK1Q7L7X3 1001 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 IFT20Q8IY31 132 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 PLD6Q8N2A8 252 aaKnown RBP19.03■□□□□ 0.64
CLK3-225ENST00000569063 TEX9Q8N6V9 391 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 SRFBP1Q8NEF9 429 aaKnown RBP19.03■□□□□ 0.64
CLK3-225ENST00000569063 ARMC2Q8NEN0 867 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 ELP5Q8TE02 316 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 DCAKDQ8WVC6 231 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 FAR1Q8WVX9 515 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 KCNC2Q96PR1 638 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 F2RL3Q96RI0 385 aa19.03■□□□□ 0.64
CLK3-225ENST00000569063 MS4A8Q9BY19 250 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms