RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 NT5DC2Q9H857 520 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 KCNK13Q9HB14 408 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 PRDM9Q9NQV7 894 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 LANCL2Q9NS86 450 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 OLAHQ9NV23 265 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 DNAJC11Q9NVH1 559 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 PLA2G3Q9NZ20 509 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 STMN3Q9NZ72 180 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 WWOXQ9NZC7 414 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 CD274Q9NZQ7 290 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 ABI3Q9P2A4 366 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 PTBP2Q9UKA9 531 aaKnown RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 RNF112Q9ULX5 631 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 SLC5A6Q9Y289 635 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 PCDHGB6Q9Y5F9 930 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 CNTRLQ7Z7A1 2325 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 USP9YO00507 2555 aaPredicted RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 RP1L1Q8IWN7 2480 aaPredicted RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 A0A087X1B8 175 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 IGKV3D-11A0A0A0MRZ8 115 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 TCRBV16S1A1N1A0A5B0 115 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 CCDC189A1A4V9 331 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 SYNDIG1LA6NDD5 238 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 WIPF3A6NGB9 483 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 SAGE2PA6NJ88 616 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 CYSRT1A8MQ03 144 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 SYCE1LA8MT33 242 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 C4orf51C9J302 202 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 TAPBPO15533 448 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 ERI3O43414 337 aaKnown RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 B4GALT2O60909 372 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 KERAO60938 352 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 DNAJB6O75190 326 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 STK16O75716 305 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 FAM155BO75949 473 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 URI1O94763 535 aaPredicted RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 RASAL1O95294 804 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 B3GALT4O96024 378 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 F10P00742 488 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 LDLRP01130 860 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 AVPP01185 164 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 CRYABP02511 175 aaKnown RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 LTA4HP09960 611 aaKnown RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 SLC35E2BP0CK96 405 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 TFEBP19484 476 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 HNRNPH1P31943 449 aaKnown RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 PHBP35232 272 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 HNF4AP41235 474 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 HSPA7P48741 367 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 PER3P56645 1201 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 TAS2R50P59544 299 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 RAB8AP61006 207 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 OLR1P78380 273 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 BTN3A2P78410 334 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 SLC7A5Q01650 507 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 GUCY2DQ02846 1103 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 TGM3Q08188 693 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 LAPTM5Q13571 262 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 DOC2AQ14183 400 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 EFTUD2Q15029 972 aaKnown RBP eCLIP4.49□□□□□ -1.694e-9■■■■■ 38.8
CLK3-219ENST00000567805 TERF2Q15554 542 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 TRADDQ15628 312 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 TBCCQ15814 346 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 PDK4Q16654 411 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 WHAMMP3Q1A5X7 153 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 C18orf21Q32NC0 220 aaPredicted RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 ADPRMQ3LIE5 342 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 C4orf17Q53FE4 359 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 XKR6Q5GH73 641 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 PAGE2BQ5JRK9 111 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 ACER2Q5QJU3 275 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 ZNF324BQ6AW86 544 aaPredicted RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 TRIM40Q6P9F5 258 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 LRRC70Q7Z2Q7 622 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 CMC1Q7Z7K0 106 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 ISCA2Q86U28 154 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 CRLF3Q8IUI8 442 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 LGI4Q8N135 537 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 BEST3Q8N1M1 668 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 CA13Q8N1Q1 262 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 SLC5A8Q8N695 610 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 HORMAD2Q8N7B1 307 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 SNX31Q8N9S9 440 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 ARMC2Q8NEN0 867 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 OR2L5Q8NG80 312 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 DNAJB8Q8NHS0 232 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 RHEBL1Q8TAI7 183 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 STAG3L4Q8TBR4 150 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 ELP5Q8TE02 316 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 ADAMTS18Q8TE60 1221 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 UBTD2Q8WUN7 234 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 CCT6BQ92526 530 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 NR4A3Q92570 626 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 EXT2Q93063 718 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 MS4A6EQ96DS6 147 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 WDR34Q96EX3 536 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 FAR2Q96K12 515 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 C16orf45Q96MC5 204 aaPredicted RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 PTCHD1Q96NR3 888 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 TAAR6Q96RI8 345 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms