RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	RTL4	Q6ZR62	310 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	ABHD13	Q7L211	337 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	ASPG	Q86U10	573 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	LIX1	Q8N485	282 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	MEIOB	Q8N635	442 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	FBXO15	Q8NCQ5	510 aa	Predicted RBP	12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	OR13J1	Q8NGT2	312 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	OR6P1	Q8NGX9	317 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	OR4L1	Q8NH43	312 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	SLC35G2	Q8TBE7	412 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	PKP4	Q99569	1192 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	AARSD1	Q9BTE6	412 aa	Known RBP	12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	C19orf24	Q9BVV8	132 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	RBM24	Q9BX46	236 aa	Known RBP	12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	LRRC40	Q9H9A6	602 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	FAM114A2	Q9NRY5	505 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	SACM1L	Q9NTJ5	587 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	TMEM184C	Q9NVA4	438 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	TUBA8	Q9NY65	449 aa	Predicted RBP	12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	JKAMP	Q9P055	326 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	C6orf203	Q9P0P8	240 aa	Predicted RBP	12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	NDRG3	Q9UGV2	375 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	NENF	Q9UMX5	172 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	HEATR5B	Q9P2D3	2071 aa		12.72	□□□□□ -0.37
SMG1-213	ENST00000567737	SCN3A	Q9NY46	2000 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	APOC4-APOC2	K7ER74	178 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	SIAH2	O43255	324 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	CHST10	O43529	356 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	SPOP	O43791	374 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	APOC2	P02655	101 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737		P04436	131 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	SLC35G6	P0C7Q6	338 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	TMEM253	P0C7T8	217 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	FAM157C	P0CG43	387 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	HRH2	P25021	359 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	SOX3	P41225	446 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	CPA2	P48052	419 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	OLR1	P78380	273 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	FOXO1	Q12778	655 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	SEMA3A	Q14563	771 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	KLHDC8B	Q8IXV7	354 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	MAPK1IP1L	Q8NDC0	245 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	SLC13A3	Q8WWT9	602 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	TM4SF19	Q96DZ7	209 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	LIN28A	Q9H9Z2	209 aa	Known RBP	12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	ANO10	Q9NW15	660 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	ZNF223	Q9UK11	482 aa	Predicted RBP	12.71	□□□□□ -0.37
SMG1-213	ENST00000567737	HYOU1	Q9Y4L1	999 aa		12.71	□□□□□ -0.37
SMG1-213	ENST00000567737		A0A087X1B8	175 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	IGKV3D-11	A0A0A0MRZ8	115 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	MACROD2	A1Z1Q3	448 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	KDM4E	B2RXH2	506 aa	Predicted RBP	12.7	□□□□□ -0.38
SMG1-213	ENST00000567737		E7ENX8	843 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	CD5L	O43866	347 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	ERN1	O75460	977 aa	Known RBP	12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	NR1H2	P55055	460 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	ADAR	P55265	1226 aa	Known RBP	12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	PRAME	P78395	509 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	TAP2	Q03519	686 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	TERF2	Q15554	542 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	XKR6	Q5GH73	641 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	WIPI1	Q5MNZ9	446 aa	Predicted RBP	12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	HECTD2	Q5U5R9	776 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	NIPAL1	Q6NVV3	410 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	ZNF534	Q76KX8	674 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	LDB1	Q86U70	411 aa	Predicted RBP	12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	SLC26A11	Q86WA9	606 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	GOLM1	Q8NBJ4	401 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	NEIL3	Q8TAT5	605 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	ZNF480	Q8WV37	535 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	NCLN	Q969V3	563 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	RASL10B	Q96S79	203 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	WDR83	Q9BRX9	315 aa	Known RBP	12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	FAM129A	Q9BZQ8	928 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	SLC6A15	Q9H2J7	730 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	NECTIN3	Q9NQS3	549 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	GALNT8	Q9NY28	637 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	MYOT	Q9UBF9	498 aa		12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	12.7	□□□□□ -0.38
SMG1-213	ENST00000567737	PSMD12	O00232	456 aa	Predicted RBP	12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	WWP2	O00308	870 aa		12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	PSTPIP1	O43586	416 aa		12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	PRKN	O60260	465 aa	Predicted RBP	12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	GALR3	O60755	368 aa	Predicted RBP	12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	SLC16A8	O95907	504 aa		12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	GAS8	O95995	478 aa		12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	IL18BP	O95998	194 aa		12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	CAT	P04040	527 aa	Known RBP	12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	COMT	P21964	271 aa		12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	ATP5D	P30049	168 aa		12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	CYLC1	P35663	651 aa	Predicted RBP	12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	TTPA	P49638	278 aa		12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	CAPRIN1	Q14444	709 aa	Known RBP	12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	DEFB134	Q4QY38	66 aa		12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	NSUN5P2	Q63ZY6	315 aa		12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	CAPN13	Q6MZZ7	669 aa	Predicted RBP	12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	DARS2	Q6PI48	645 aa	Known RBP	12.69	□□□□□ -0.38
SMG1-213	ENST00000567737	SASS6	Q6UVJ0	657 aa		12.69	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms