RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CHD2O14647 1828 aaKnown RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 MAP3K1Q13233 1512 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 EFCAB6Q5THR3 1501 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 KDM5DQ9BY66 1539 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 ROCK1Q13464 1354 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 DHX57Q6P158 1386 aaKnown RBP1.44□□□□□ -2.18
SMG1-212ENST00000566328 ANKRD30BQ9BXX2 1392 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 JCADQ9P266 1359 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 TMEM131LA2VDJ0 1609 aa1.44□□□□□ -2.18
SMG1-212ENST00000566328 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.43□□□□□ -2.18
SMG1-212ENST00000566328 ACEP12821 1306 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 RPGRIP1LQ68CZ1 1315 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 MED1Q15648 1581 aaPredicted RBP1.43□□□□□ -2.18
SMG1-212ENST00000566328 MAST1Q9Y2H9 1570 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 RRBP1Q9P2E9 1410 aaKnown RBP1.43□□□□□ -2.18
SMG1-212ENST00000566328 MROH2AA6NES4 1674 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 ZC3H13Q5T200 1668 aaKnown RBP1.43□□□□□ -2.18
SMG1-212ENST00000566328 ROBO1Q9Y6N7 1651 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 TRAV9-2A0A087WT02 112 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 PINLYPA6NC86 204 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 PTGES3LE9PB15 166 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 MAGEB2O15479 319 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 RPS6KA5O75582 802 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 RHBDL1O75783 438 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 BAG3O95817 575 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 IGHG1P01857 330 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 ASNSP08243 561 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 NR2C1P13056 603 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 CD1EP15812 388 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 ACHEP22303 614 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 DNASE1P24855 282 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 ALDH1B1P30837 517 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 SFTPDP35247 375 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 TNNT2P45379 298 aaPredicted RBP1.43□□□□□ -2.18
SMG1-212ENST00000566328 LHX1P48742 406 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 G3BP1Q13283 466 aaKnown RBP eCLIP1.43□□□□□ -2.18
SMG1-212ENST00000566328 ITPK1Q13572 414 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 DHX8Q14562 1220 aaKnown RBP1.43□□□□□ -2.18
SMG1-212ENST00000566328 NPTX1Q15818 432 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 CBWD6Q4V339 395 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 CBWD3Q5JTY5 395 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 CGB2Q6NT52 195 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 ARMCX5Q6P1M9 558 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 IL17RELQ6ZVW7 336 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 C5orf24Q7Z6I8 188 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 CCDC60Q8IWA6 550 aaPredicted RBP1.43□□□□□ -2.18
SMG1-212ENST00000566328 ZNF595Q8IYB9 648 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 BANPQ8N9N5 519 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 BEST4Q8NFU0 473 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 OR10S1Q8NGN2 331 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 OR1B1Q8NGR6 318 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 RNF138Q8WVD3 245 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 GTSF1Q8WW33 167 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 PAXXQ9BUH6 204 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 RNF121Q9H920 327 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 POLKQ9UBT6 870 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 AASSQ9UDR5 926 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 PILRBQ9UKJ0 227 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 CPQQ9Y646 472 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 SLIT1O75093 1534 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 RNF17Q9BXT8 1623 aaKnown RBP1.43□□□□□ -2.18
SMG1-212ENST00000566328 SETD1AO15047 1707 aaKnown RBP1.43□□□□□ -2.18
SMG1-212ENST00000566328 PHLPP1O60346 1717 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 POLR1AO95602 1720 aaPredicted RBP1.43□□□□□ -2.18
SMG1-212ENST00000566328 ADGRL2O95490 1459 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 C1orf167Q5SNV9 1468 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 BCL9LQ86UU0 1499 aa1.43□□□□□ -2.18
SMG1-212ENST00000566328 NEDD4P46934 1319 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 SALL1Q9NSC2 1324 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 GCC2Q8IWJ2 1684 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 SPATA31E1Q6ZUB1 1445 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 YTHDC2Q9H6S0 1430 aaKnown RBP1.42□□□□□ -2.18
SMG1-212ENST00000566328 CPS1P31327 1500 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 LMTK2Q8IWU2 1503 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 DEPDC5O75140 1603 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 CLTCL1P53675 1640 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 A0A087X0M5 115 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 LOC102723996A0A087X1L8 192 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 TRAV24A0A0B4J272 114 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 A0A1B0GX30 115 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 ZSCAN5CA6NGD5 496 aaPredicted RBP1.42□□□□□ -2.18
SMG1-212ENST00000566328 GLTPD2A6NH11 291 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 A8MVM7 634 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 TBX18O95935 607 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 LINGO3P0C6S8 592 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 ASCL1P50553 236 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 IST1P53990 364 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 PRKCEQ02156 737 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 MECOMQ03112 1051 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 RASGEF1BQ0VAM2 473 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 PRKG2Q13237 762 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 KRT32Q14532 448 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 KIAA0040Q15053 153 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 SNAPC1Q16533 368 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 PLEKHS1Q5SXH7 462 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 C9orf129Q5T035 196 aaKnown RBP1.42□□□□□ -2.18
SMG1-212ENST00000566328 UBQLNLQ8IYU4 475 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 RNF175Q8N4F7 328 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 LRTM2Q8N967 370 aa1.42□□□□□ -2.18
SMG1-212ENST00000566328 FAM104AQ969W3 186 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms