RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 B3GALT5Q9Y2C3 310 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 RALGAPA1Q6GYQ0 2036 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 GVINP1Q7Z2Y8 2422 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 A8MZ25 164 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 USP17L23D6RBM5 183 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 TRDMT1O14717 391 aaKnown RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 PPEF2O14830 753 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 EXTL3O43909 919 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 SMIM24O75264 130 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 RFPL2O75678 378 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 DDHD2O94830 711 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 LCKP06239 509 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 T-ENOLP0DO92 83 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 GCAP28676 217 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 SSTR2P30874 369 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 CDH5P33151 784 aaPredicted RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 GRSF1Q12849 480 aaKnown RBP eCLIP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 DNAJC3Q13217 504 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 SF3A2Q15428 464 aaKnown RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 HIST2H2ACQ16777 129 aaPredicted RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 TFDP3Q5H9I0 405 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 CFAP77Q6ZQR2 320 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 TRILQ7L0X0 811 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 OTOAQ7RTW8 1153 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 CCDC60Q8IWA6 550 aaPredicted RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 OR8H2Q8N162 312 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 BANPQ8N9N5 519 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 TMEM161BQ8NDZ6 487 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 STKLD1Q8NE28 680 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 GABPB2Q8TAK5 448 aaPredicted RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 CCDC110Q8TBZ0 833 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 TEKT4Q8WW24 435 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 PRCCQ92733 491 aaPredicted RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 RPL36ALQ969Q0 106 aaKnown RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 MCUR1Q96AQ8 359 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 FBXL8Q96CD0 374 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 SLITRK1Q96PX8 696 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 CYTH2Q99418 400 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 KXD1Q9BQD3 176 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 CBWD1Q9BRT8 395 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 NFKBIZQ9BYH8 718 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 WWP1Q9H0M0 922 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 HEBP1Q9NRV9 189 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 ANKRD10Q9NXR5 420 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 WDR35Q9P2L0 1181 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 COPG2Q9UBF2 871 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 MTRRQ9UBK8 725 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 CDC14AQ9UNH5 594 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 STYXL1Q9Y6J8 313 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 DOCK5Q9H7D0 1870 aa4.03□□□□□ -1.76
LINC00561-201ENST00000565815 RIF1Q5UIP0 2472 aaKnown RBP4.03□□□□□ -1.76
LINC00561-201ENST00000565815 COL4A2P08572 1712 aa4.03□□□□□ -1.77
LINC00561-201ENST00000565815 CHD9Q3L8U1 2897 aa4.03□□□□□ -1.77
LINC00561-201ENST00000565815 hDV102S1A0JD36 115 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 SIGLEC16A6NMB1 481 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 C4orf47A7E2U8 309 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 I3L4J1 428 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 J3QKU1 62 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 BIRC5O15392 142 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 GYG2O15488 501 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 ADAM20O43506 726 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 CCNDBP1O95273 360 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 PSMG1O95456 288 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 ADRB2P07550 413 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 KRT5P13647 590 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 GNLYP22749 145 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 YWHABP31946 246 aaKnown RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 STIP1P31948 543 aaKnown RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 KRT20P35900 424 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 ARSEP51690 589 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 MXD4Q14582 209 aaPredicted RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 OASLQ15646 514 aaKnown RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 TAZQ16635 292 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 MAPK6Q16659 721 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 HADHQ16836 314 aaKnown RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 TAF1BQ53T94 588 aaPredicted RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 SLC36A4Q6YBV0 504 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 LRRC74BQ6ZQY2 392 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 ARCQ7LC44 396 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 GLRX5Q86SX6 157 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 KBTBD6Q86V97 674 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 DNAAF5Q86Y56 855 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 TMEM126BQ8IUX1 230 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 FAM185AQ8N0U4 392 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 PDIK1LQ8N165 341 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 IL17RCQ8NAC3 791 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 ACVR1CQ8NER5 493 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 PYROXD1Q8WU10 500 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 FAM210AQ96ND0 272 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 ZNF184Q99676 751 aaPredicted RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 CENPKQ9BS16 269 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 TSSK1BQ9BXA7 367 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 DENND2DQ9H6A0 471 aaPredicted RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 DHX33Q9H6R0 707 aaKnown RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 VPS37BQ9H9H4 285 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 DMAP1Q9NPF5 467 aaPredicted RBP4.02□□□□□ -1.77
LINC00561-201ENST00000565815 ASAH2Q9NR71 780 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 DECR2Q9NUI1 292 aa4.02□□□□□ -1.77
LINC00561-201ENST00000565815 OCIAD1Q9NX40 245 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms