RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 FBXO15Q8NCQ5 510 aaPredicted RBP21.4■■□□□ 1.02
SPSB3-206ENST00000564709 GOT1L1Q8NHS2 421 aaPredicted RBP21.4■■□□□ 1.02
SPSB3-206ENST00000564709 PROX1Q92786 737 aa21.4■■□□□ 1.02
SPSB3-206ENST00000564709 OTUB2Q96DC9 234 aa21.4■■□□□ 1.02
SPSB3-206ENST00000564709 WDR34Q96EX3 536 aa21.4■■□□□ 1.02
SPSB3-206ENST00000564709 ZNF347Q96SE7 839 aa21.4■■□□□ 1.02
SPSB3-206ENST00000564709 NIPSNAP1Q9BPW8 284 aa21.4■■□□□ 1.02
SPSB3-206ENST00000564709 ZCCHC2Q9C0B9 1178 aaKnown RBP21.4■■□□□ 1.02
SPSB3-206ENST00000564709 CCNB1IP1Q9NPC3 277 aa21.4■■□□□ 1.02
SPSB3-206ENST00000564709 M0R129 80 aa21.39■■□□□ 1.02
SPSB3-206ENST00000564709 GPR37L1O60883 481 aa21.39■■□□□ 1.02
SPSB3-206ENST00000564709 SULT1C4O75897 302 aa21.39■■□□□ 1.02
SPSB3-206ENST00000564709 VIPR2P41587 438 aa21.39■■□□□ 1.02
SPSB3-206ENST00000564709 MVKQ03426 396 aa21.39■■□□□ 1.02
SPSB3-206ENST00000564709 PDE7AQ13946 482 aa21.39■■□□□ 1.02
SPSB3-206ENST00000564709 FAM71E1Q6IPT2 247 aa21.39■■□□□ 1.02
SPSB3-206ENST00000564709 P3H2Q8IVL5 708 aa21.39■■□□□ 1.02
SPSB3-206ENST00000564709 OR9Q2Q8NGE9 314 aa21.39■■□□□ 1.02
SPSB3-206ENST00000564709 HCAR2Q8TDS4 363 aa21.39■■□□□ 1.02
SPSB3-206ENST00000564709 EPHX3Q9H6B9 360 aa21.39■■□□□ 1.02
SPSB3-206ENST00000564709 PNMA8BQ9ULN7 279 aaPredicted RBP21.39■■□□□ 1.02
SPSB3-206ENST00000564709 TMEM98Q9Y2Y6 226 aa21.39■■□□□ 1.02
SPSB3-206ENST00000564709 PMF1-BGLAPU3KQ54 211 aa21.39■■□□□ 1.02
SPSB3-206ENST00000564709 CLDN25C9JDP6 229 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 E9PQ18 207 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 ADAMDEC1O15204 470 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 DPM1O60762 260 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 CBFA2T3O75081 653 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 PRNPP04156 253 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 CCR3P51677 355 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 NUDT6P53370 316 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 FCHO2Q0JRZ9 810 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 RGS21Q2M5E4 152 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 VN1R5Q7Z5H4 357 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 LGI4Q8N135 537 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 CHPT1Q8WUD6 406 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 MYNNQ9NPC7 610 aa21.39■■□□□ 1.01
SPSB3-206ENST00000564709 OR2A25A4D2G3 310 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 C21orf33P30042 268 aaPredicted RBP21.38■■□□□ 1.01
SPSB3-206ENST00000564709 IDH2P48735 452 aaKnown RBP21.38■■□□□ 1.01
SPSB3-206ENST00000564709 CDK6Q00534 326 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 SYT16Q17RD7 645 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 CCDC103Q8IW40 242 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 METTL4Q8N3J2 472 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 OR5AR1Q8NGP9 310 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 COPS4Q9BT78 406 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 ZDHHC5Q9C0B5 715 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 AKIP1Q9NQ31 210 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 NECTIN3Q9NQS3 549 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 C1GALT1Q9NS00 363 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.38■■□□□ 1.012e-8■■■■■ 31.8
SPSB3-206ENST00000564709 ASF1AQ9Y294 204 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 INSL6Q9Y581 213 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 ANTXRLA6NF34 631 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 POU2F1P14859 743 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 CD36P16671 472 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 TGFBR2P37173 567 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 CYP4F2P78329 520 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 GANABQ14697 944 aaKnown RBP21.38■■□□□ 1.01
SPSB3-206ENST00000564709 ZNF846Q147U1 533 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 ADCK1Q86TW2 530 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 OR4C15Q8NGM1 316 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 TAS2R9Q9NYW1 312 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 SH3GLB1Q9Y371 365 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 MRPS23Q9Y3D9 190 aaKnown RBP21.38■■□□□ 1.01
SPSB3-206ENST00000564709 SNX8Q9Y5X2 465 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 ALPK3Q96L96 1907 aa21.38■■□□□ 1.01
SPSB3-206ENST00000564709 KIAA0100Q14667 2235 aaKnown RBP21.37■■□□□ 1.01
SPSB3-206ENST00000564709 PRAMEF33A0A0G2JMD5 474 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 A0A1W2PRB8 838 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 SLC9A3R1O14745 358 aaPredicted RBP21.37■■□□□ 1.01
SPSB3-206ENST00000564709 PRAMEF10O60809 474 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 ITGB7P26010 798 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 GGT2P36268 569 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 LRRC74AQ0VAA2 488 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 PRAMEF14Q5SWL7 426 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 C9orf64Q5T6V5 341 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 PRAMEF13Q5VWM6 474 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 EGFLAMQ63HQ2 1017 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 IPCEF1Q8WWN9 437 aaPredicted RBP21.37■■□□□ 1.01
SPSB3-206ENST00000564709 SIGLEC11Q96RL6 698 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 SLC6A16Q9GZN6 736 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 ARMC7Q9H6L4 198 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 ITM2CQ9NQX7 267 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 SAGE1Q9NXZ1 904 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 CFAP20Q9Y6A4 193 aaKnown RBP21.37■■□□□ 1.01
SPSB3-206ENST00000564709 OTOL1A6NHN0 477 aaPredicted RBP21.37■■□□□ 1.01
SPSB3-206ENST00000564709 PAPLNO95428 1278 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 ADRB3P13945 408 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 SLC19A1P41440 591 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 RPS26P62854 115 aaKnown RBP21.37■■□□□ 1.01
SPSB3-206ENST00000564709 PERM1Q5SV97 790 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 OXR1Q8N573 874 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 PLA2G15Q8NCC3 412 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 SPPL3Q8TCT6 385 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 DYNC2LI1Q8TCX1 351 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 UTP15Q8TED0 518 aaKnown RBP21.37■■□□□ 1.01
SPSB3-206ENST00000564709 EHD1Q9H4M9 534 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 C11orf49Q9H6J7 331 aa21.37■■□□□ 1.01
SPSB3-206ENST00000564709 HMG20AQ9NP66 347 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms