RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 RCN2Q14257 317 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 ADPRMQ3LIE5 342 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 TNFAIP8L3Q5GJ75 292 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 FAM69BQ5VUD6 431 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 ADNP2Q6IQ32 1131 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 ABHD17CQ6PCB6 329 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 PDSS2Q86YH6 399 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 NUDCD3Q8IVD9 361 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 HOMEZQ8IX15 550 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 CDYL2Q8N8U2 506 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 PPP1R14CQ8TAE6 165 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 WDR20Q8TBZ3 569 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 APOBEC4Q8WW27 367 aaKnown RBP15.12■□□□□ 0.01
RAB40C-208ENST00000564703 SELENOMQ8WWX9 145 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 METTL21AQ8WXB1 218 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 PEX11GQ96HA9 241 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 SERINC2Q96SA4 455 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 SERPINI1Q99574 410 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 NPLQ9BXD5 320 aaPredicted RBP15.12■□□□□ 0.01
RAB40C-208ENST00000564703 OR51B5Q9H339 312 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 TMBIM4Q9HC24 238 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 C3orf18Q9UK00 162 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 MKL2Q9ULH7 1088 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 MAN2B2Q9Y2E5 1009 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 EPG5Q9HCE0 2579 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 CNOT3O75175 753 aaKnown RBP15.11■□□□□ 0.01
RAB40C-208ENST00000564703 ZWINTO95229 277 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 BMP10O95393 424 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 ESRRBO95718 433 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 B3GALT4O96024 378 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 RNH1P13489 461 aaKnown RBP15.11■□□□□ 0.01
RAB40C-208ENST00000564703 H2AFXP16104 143 aaPredicted RBP15.11■□□□□ 0.01
RAB40C-208ENST00000564703 JAK1P23458 1154 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 CCR10P46092 362 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 RRADP55042 308 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 SNRPNP63162 240 aaKnown RBP15.11■□□□□ 0.01
RAB40C-208ENST00000564703 CUL3Q13618 768 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 PCLAFQ15004 111 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 MINDY4Q4G0A6 757 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 ATP1A1-AS1Q5TC04 95 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 OR4C11Q6IEV9 310 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 LETMD1Q6P1Q0 360 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 BORAQ6PGQ7 559 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 FRMD7Q6ZUT3 714 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 LAPTM4BQ86VI4 370 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 OR5T3Q8NGG3 340 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 FER1L6-AS2Q96M78 137 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 OR1F2PQ96R84 312 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 SPSB2Q99619 263 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 TRMOQ9BU70 441 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 SLC29A3Q9BZD2 475 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 GSTO2Q9H4Y5 243 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 EML4Q9HC35 981 aaKnown RBP15.11■□□□□ 0.01
RAB40C-208ENST00000564703 DMRT3Q9NQL9 472 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 SPACA6W5XKT8 324 aa15.11■□□□□ 0.01
RAB40C-208ENST00000564703 USP24Q9UPU5 2620 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 IDSB3KWA1 339 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 SAP18O00422 153 aaKnown RBP15.1■□□□□ 0.01
RAB40C-208ENST00000564703 PCDH17O14917 1159 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 UMODP07911 640 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 FURINP09958 794 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 SSR2P43308 183 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 TSFMP43897 325 aaKnown RBP15.1■□□□□ 0.01
RAB40C-208ENST00000564703 ARFIP1P53367 373 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 OLR1P78380 273 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 IL10RAQ13651 578 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 TBR1Q16650 682 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 HHATQ5VTY9 493 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 MED25Q71SY5 747 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 RNF175Q8N4F7 328 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 TBC1D20Q96BZ9 403 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 PAIP2Q9BPZ3 127 aaKnown RBP15.1■□□□□ 0.01
RAB40C-208ENST00000564703 GATA5Q9BWX5 397 aaPredicted RBP15.1■□□□□ 0.01
RAB40C-208ENST00000564703 VIPAS39Q9H9C1 493 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 PRDM7Q9NQW5 492 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 PPT2Q9UMR5 302 aa15.1■□□□□ 0.01
RAB40C-208ENST00000564703 MRPS33Q9Y291 106 aaKnown RBP15.1■□□□□ 0.01
RAB40C-208ENST00000564703 MANBAO00462 879 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 CLDN4O14493 209 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 B4GALT2O60909 372 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 PDYNP01213 254 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 BPGMP07738 259 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 ATP5A1P25705 553 aaKnown RBP15.09■□□□□ 0.01
RAB40C-208ENST00000564703 FOXL2P58012 376 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 MAGOHP61326 146 aaKnown RBP15.09■□□□□ 0.01
RAB40C-208ENST00000564703 ZNF33BQ06732 778 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 RUNX2Q13950 521 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 TUBB8Q3ZCM7 444 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 AGBL2Q5U5Z8 902 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 FAAH2Q6GMR7 532 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 ZC3H7AQ8IWR0 971 aaKnown RBP15.09■□□□□ 0.01
RAB40C-208ENST00000564703 ACOT4Q8N9L9 421 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 TMEM102Q8N9M5 508 aaPredicted RBP15.09■□□□□ 0.01
RAB40C-208ENST00000564703 ADAMTS17Q8TE56 1095 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 ADAMTS18Q8TE60 1221 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 EXTL1Q92935 676 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 QRFPRQ96P65 431 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 MECRQ9BV79 373 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 AICDAQ9GZX7 198 aa15.09■□□□□ 0.01
RAB40C-208ENST00000564703 ACBD3Q9H3P7 528 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms