RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 E7ESA3 106 aa22.32■■□□□ 1.16
NME3-206ENST00000564252 ESRRAP11474 423 aaPredicted RBP22.32■■□□□ 1.16
NME3-206ENST00000564252 AGAP20933 346 aa22.32■■□□□ 1.16
NME3-206ENST00000564252 GDF5P43026 501 aa22.32■■□□□ 1.16
NME3-206ENST00000564252 HLCSP50747 726 aa22.32■■□□□ 1.16
NME3-206ENST00000564252 SLCO4C1Q6ZQN7 724 aa22.32■■□□□ 1.16
NME3-206ENST00000564252 ADAMTSL2Q86TH1 951 aa22.32■■□□□ 1.16
NME3-206ENST00000564252 CPSF7Q8N684 471 aaKnown RBP22.32■■□□□ 1.16
NME3-206ENST00000564252 APCDD1LQ8NCL9 501 aa22.32■■□□□ 1.16
NME3-206ENST00000564252 ARMC2Q8NEN0 867 aa22.32■■□□□ 1.16
NME3-206ENST00000564252 RHBDF1Q96CC6 855 aa22.32■■□□□ 1.16
NME3-206ENST00000564252 DEFB126Q9BYW3 111 aa22.32■■□□□ 1.16
NME3-206ENST00000564252 CTNNAL1Q9UBT7 734 aa22.32■■□□□ 1.16
NME3-206ENST00000564252 MEMO1Q9Y316 297 aa22.32■■□□□ 1.16
NME3-206ENST00000564252 MMACHCQ9Y4U1 282 aa22.32■■□□□ 1.16
NME3-206ENST00000564252 USP27XA6NNY8 438 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 ZNHIT1O43257 154 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 WDR47O94967 919 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 C1GALT1C1LP0DN25 315 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 ZNF24P17028 368 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 GNAZP19086 355 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 PTGER4P35408 488 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 STXBP1P61764 594 aaKnown RBP22.31■■□□□ 1.16
NME3-206ENST00000564252 BTN3A2P78410 334 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 HSF1Q00613 529 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 FRA10AC1Q70Z53 315 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 GHDCQ8N2G8 530 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 GAL3ST3Q96A11 431 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 TRIM31Q9BZY9 425 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 RHOJQ9H4E5 214 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 POPDC3Q9HBV1 291 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 GPAMQ9HCL2 828 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 GTF3C1Q12789 2109 aa22.31■■□□□ 1.16
NME3-206ENST00000564252 HNRNPH1P31943 449 aaKnown RBP22.3■■□□□ 1.16
NME3-206ENST00000564252 SMSP52788 366 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 CBLBQ13191 982 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 RUNX2Q13950 521 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 SLBPQ14493 270 aaKnown RBP eCLIP22.3■■□□□ 1.16
NME3-206ENST00000564252 CDSNQ15517 529 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 TERF2Q15554 542 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 SCUBE1Q8IWY4 988 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 B3GNT7Q8NFL0 401 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 TTLQ8NG68 377 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 TMEM125Q96AQ2 219 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 MS4A6EQ96DS6 147 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 VPS39Q96JC1 886 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 PDLIM2Q96JY6 352 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 NSMCE4AQ9NXX6 385 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 CLDN16Q9Y5I7 305 aa22.3■■□□□ 1.16
NME3-206ENST00000564252 A0A0G2JN53 185 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 TRBV11-1A0A0K0K1C0 115 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 LRIT2A6NDA9 550 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 FCHO1O14526 889 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 H2AFYO75367 372 aaKnown RBP22.29■■□□□ 1.16
NME3-206ENST00000564252 MYO1DO94832 1006 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 WISP3O95389 354 aaPredicted RBP22.29■■□□□ 1.16
NME3-206ENST00000564252 SNRPB2P08579 225 aaKnown RBP22.29■■□□□ 1.16
NME3-206ENST00000564252 ABOP16442 354 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 TMIGD1Q6UXZ0 262 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 NCCRP1Q6ZVX7 275 aaPredicted RBP22.29■■□□□ 1.16
NME3-206ENST00000564252 GDF7Q7Z4P5 450 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 FGD2Q7Z6J4 655 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 FAR2Q96K12 515 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 PHF12Q96QT6 1004 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 NPLQ9BXD5 320 aaPredicted RBP22.29■■□□□ 1.16
NME3-206ENST00000564252 DERL2Q9GZP9 239 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 SMYD2Q9NRG4 433 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 ZNF223Q9UK11 482 aaPredicted RBP22.29■■□□□ 1.16
NME3-206ENST00000564252 PPIEQ9UNP9 301 aaKnown RBP22.29■■□□□ 1.16
NME3-206ENST00000564252 ASB1Q9Y576 335 aa22.29■■□□□ 1.16
NME3-206ENST00000564252 NCF1BA6NI72 391 aaPredicted RBP22.28■■□□□ 1.16
NME3-206ENST00000564252 NCF1CA8MVU1 366 aaPredicted RBP22.28■■□□□ 1.16
NME3-206ENST00000564252 TGFBR3LH3BV60 316 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 CCDC188H7C350 402 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 ERI3O43414 337 aaKnown RBP22.28■■□□□ 1.16
NME3-206ENST00000564252 PIAS1O75925 651 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 TBX6O95947 436 aaPredicted RBP22.28■■□□□ 1.16
NME3-206ENST00000564252 NCF1P14598 390 aaPredicted RBP22.28■■□□□ 1.16
NME3-206ENST00000564252 COX6B1P14854 86 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 RPL21P46778 160 aaKnown RBP22.28■■□□□ 1.16
NME3-206ENST00000564252 CLCN2P51788 898 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 HNRNPFP52597 415 aaKnown RBP22.28■■□□□ 1.16
NME3-206ENST00000564252 TGFBIQ15582 683 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 DOLPP1Q86YN1 238 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 ZBED8Q8IZ13 594 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 TMEM52Q8NDY8 209 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 AGAP11Q8TF27 550 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 QRFPRQ96P65 431 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 TMEM79Q9BSE2 394 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 NT5DC2Q9H857 520 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 SAR1BQ9Y6B6 198 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 CACNA1CQ13936 2221 aa22.28■■□□□ 1.16
NME3-206ENST00000564252 EFCAB8A8MWE9 144 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 TAPBPO15533 448 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 ELAVL4P26378 380 aaKnown RBP22.27■■□□□ 1.16
NME3-206ENST00000564252 GSTM2P28161 218 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 PTGER1P34995 402 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 MEOX1P50221 254 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 POU4F1Q01851 419 aa22.27■■□□□ 1.16
NME3-206ENST00000564252 ADPRMQ3LIE5 342 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms