RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CMC1Q7Z7K0 106 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 KLHDC8AQ8IYD2 350 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 FBF1Q8TES7 1133 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 MRRFQ96E11 262 aaKnown RBP16.58■□□□□ 0.24
NME3-205ENST00000563854 SMIM10Q96HG1 83 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 ALG9Q9H6U8 611 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 GPRC5BQ9NZH0 403 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 SEC14L3Q9UDX4 400 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 SH3BGRL2Q9UJC5 107 aa16.58■□□□□ 0.24
NME3-205ENST00000563854 SAGE2PA6NJ88 616 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 ZG16O60844 167 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 STK16O75716 305 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 STX2P32856 288 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 CD96P40200 585 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 SLC7A5Q01650 507 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 PDK4Q16654 411 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 GRTP1Q5TC63 336 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 SPINK14Q6IE38 97 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 ADNP2Q6IQ32 1131 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 ZDHHC24Q6UX98 284 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 FAM47BQ8NA70 645 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 MS4A6EQ96DS6 147 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 CAPS2Q9BXY5 557 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 COPS7BQ9H9Q2 264 aaPredicted RBP16.57■□□□□ 0.24
NME3-205ENST00000563854 CLK4Q9HAZ1 481 aaKnown RBP16.57■□□□□ 0.24
NME3-205ENST00000563854 SVILO95425 2214 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 CROCCQ5TZA2 2017 aa16.57■□□□□ 0.24
NME3-205ENST00000563854 NBPF19A0A087WUL8 3843 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 A0A088AWK7 358 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 TRGV8A0A0C4DH27 118 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 A0A1B0GUH1 482 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 TCRBV16S1A1N1A0A5B0 115 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 ESYT3A0FGR9 886 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 SUPT3HB4E1H0 165 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 B3GALT2O43825 422 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 SUPT3HO75486 399 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 STSP08842 583 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 CD46P15529 392 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 TFEBP19484 476 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 ZNF10P21506 573 aaPredicted RBP16.56■□□□□ 0.24
NME3-205ENST00000563854 EEF1DP29692 281 aaKnown RBP16.56■□□□□ 0.24
NME3-205ENST00000563854 RUNX2Q13950 521 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 DOC2AQ14183 400 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 ZKSCAN8Q15776 578 aaPredicted RBP16.56■□□□□ 0.24
NME3-205ENST00000563854 C8orf74Q6P047 294 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 TRIM40Q6P9F5 258 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 TBC1D1Q86TI0 1168 aaPredicted RBP16.56■□□□□ 0.24
NME3-205ENST00000563854 RPS19BP1Q86WX3 136 aaKnown RBP16.56■□□□□ 0.24
NME3-205ENST00000563854 MDS2Q8NDY4 140 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 DNAJB8Q8NHS0 232 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 KIAA1191Q96A73 305 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 REXO4Q9GZR2 422 aaKnown RBP16.56■□□□□ 0.24
NME3-205ENST00000563854 TSPAN10Q9H1Z9 355 aaPredicted RBP16.56■□□□□ 0.24
NME3-205ENST00000563854 PNO1Q9NRX1 252 aaKnown RBP16.56■□□□□ 0.24
NME3-205ENST00000563854 DOPEY1Q5JWR5 2465 aa16.56■□□□□ 0.24
NME3-205ENST00000563854 IGKV3D-11A0A0A0MRZ8 115 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 LRIT2A6NDA9 550 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 PRAMEF4O60810 478 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 CLEC3AO75596 197 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 MYO1DO94832 1006 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 C1QAP02745 245 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 CERS1P27544 350 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 GSTM2P28161 218 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 TPP2P29144 1249 aaPredicted RBP16.55■□□□□ 0.24
NME3-205ENST00000563854 GGT5P36269 586 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 DCTP40126 519 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 RAB38P57729 211 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 IRF8Q02556 426 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 CKAP4Q07065 602 aaKnown RBP16.55■□□□□ 0.24
NME3-205ENST00000563854 SLC13A2Q13183 592 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 UAP1Q16222 522 aaPredicted RBP16.55■□□□□ 0.24
NME3-205ENST00000563854 PRAMEF9Q5VWM5 478 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 CYS1Q717R9 158 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 VN1R5Q7Z5H4 357 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 CLNKQ7Z7G1 428 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 HORMAD2Q8N7B1 307 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 TMEM178AQ8NBL3 297 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 PDPRQ8NCN5 879 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 OR2L5Q8NG80 312 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 ELP5Q8TE02 316 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 THAP3Q8WTV1 239 aaPredicted RBP16.55■□□□□ 0.24
NME3-205ENST00000563854 PTCD3Q96EY7 689 aaKnown RBP16.55■□□□□ 0.24
NME3-205ENST00000563854 PHACTR1Q9C0D0 580 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 PRTFDC1Q9NRG1 225 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 LRFN1Q9P244 771 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 MMACHCQ9Y4U1 282 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 ASB1Q9Y576 335 aa16.55■□□□□ 0.24
NME3-205ENST00000563854 TRBV11-1A0A0K0K1C0 115 aa16.54■□□□□ 0.24
NME3-205ENST00000563854 UBXN8O00124 270 aa16.54■□□□□ 0.24
NME3-205ENST00000563854 SH3BGRLO75368 114 aa16.54■□□□□ 0.24
NME3-205ENST00000563854 SLC35E2BP0CK96 405 aa16.54■□□□□ 0.24
NME3-205ENST00000563854 PCNAP12004 261 aa16.54■□□□□ 0.24
NME3-205ENST00000563854 CD22P20273 847 aa16.54■□□□□ 0.24
NME3-205ENST00000563854 PPP2R1BP30154 601 aa16.54■□□□□ 0.24
NME3-205ENST00000563854 MSH2P43246 934 aa16.54■□□□□ 0.24
NME3-205ENST00000563854 HNRNPFP52597 415 aaKnown RBP16.54■□□□□ 0.24
NME3-205ENST00000563854 RBPJQ06330 500 aa16.54■□□□□ 0.24
NME3-205ENST00000563854 DLG1Q12959 904 aa16.54■□□□□ 0.24
NME3-205ENST00000563854 CHIT1Q13231 466 aa16.54■□□□□ 0.24
NME3-205ENST00000563854 BMPR2Q13873 1038 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms