RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 DMRTA2Q96SC8 542 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 CCDC77Q9BR77 488 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 SLC6A16Q9GZN6 736 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 TRIM45Q9H8W5 580 aaPredicted RBP12.13□□□□□ -0.47
SF3B3-202ENST00000562722 MCCC2Q9HCC0 563 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 ERVK-11Q9UQG0 969 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 SLC22A14Q9Y267 594 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 VWA7Q9Y334 891 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 KCNE2Q9Y6J6 123 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 IGKV3D-11A0A0A0MRZ8 115 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 CTAGE15A4D2H0 777 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 NPEPPSL1A6NEC2 478 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 FAM90A27PA6NNH2 459 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 DNALI1O14645 258 aaPredicted RBP12.12□□□□□ -0.47
SF3B3-202ENST00000562722 TFEBP19484 476 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 SSR4P51571 173 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 STXBP1P61764 594 aaKnown RBP12.12□□□□□ -0.47
SF3B3-202ENST00000562722 SLC13A2Q13183 592 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 MSS51Q4VC12 460 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 TMEM211Q6ICI0 200 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 NXPE4Q6UWF7 544 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 FRA10AC1Q70Z53 315 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 CTAGE6Q86UF2 777 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 PRM3Q9NNZ6 103 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 TIMMDC1Q9NPL8 285 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 CORO1CQ9ULV4 474 aaPredicted RBP12.12□□□□□ -0.47
SF3B3-202ENST00000562722 CHMP2BQ9UQN3 213 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 MMACHCQ9Y4U1 282 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 AKAP9Q99996 3911 aa12.12□□□□□ -0.47
SF3B3-202ENST00000562722 NCOA6Q14686 2063 aaPredicted RBP12.12□□□□□ -0.47
SF3B3-202ENST00000562722 PDZD2O15018 2839 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 A0A0G2JN53 185 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 C4orf51C9J302 202 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 H2AFYO75367 372 aaKnown RBP12.11□□□□□ -0.47
SF3B3-202ENST00000562722 TUBB4AP04350 444 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 SERPINA6P08185 405 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 CCZ1BP86790 482 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 CCZ1P86791 482 aaPredicted RBP12.11□□□□□ -0.47
SF3B3-202ENST00000562722 PLGLB1Q02325 96 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 CMPK2Q5EBM0 449 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 TEDDM1Q5T9Z0 273 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 ARHGAP11AQ6P4F7 1023 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 SBSNQ6UWP8 590 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 MDGA2Q7Z553 956 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 GALNT7Q86SF2 657 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 IGDCC3Q8IVU1 814 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.11□□□□□ -0.47
SF3B3-202ENST00000562722 PDIK1LQ8N165 341 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 FAM47BQ8NA70 645 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 APCDD1LQ8NCL9 501 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 ASB5Q8WWX0 329 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 SREK1Q8WXA9 508 aaKnown RBP12.11□□□□□ -0.47
SF3B3-202ENST00000562722 NCLNQ969V3 563 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 VMP1Q96GC9 406 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 ENKD1Q9H0I2 346 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 DEFB127Q9H1M4 99 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 TP63Q9H3D4 680 aaPredicted RBP12.11□□□□□ -0.47
SF3B3-202ENST00000562722 PRTFDC1Q9NRG1 225 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 KCMF1Q9P0J7 381 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 IKZF3Q9UKT9 509 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 MRPS33Q9Y291 106 aaKnown RBP12.11□□□□□ -0.47
SF3B3-202ENST00000562722 PCNX1Q96RV3 2341 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 F8P00451 2351 aa12.11□□□□□ -0.47
SF3B3-202ENST00000562722 A0A088AWK7 358 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 NKX2-6A6NCS4 301 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 FAM166BA8MTA8 275 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 A8MVJ9 347 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 ACOT7O00154 380 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 CDC7O00311 574 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 CLDN4O14493 209 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 ERI3O43414 337 aaKnown RBP12.1□□□□□ -0.47
SF3B3-202ENST00000562722 B3GALT2O43825 422 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 ZFAND5O76080 213 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 WDR47O94967 919 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 IFNA16P05015 189 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 GNAZP19086 355 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 ZNF10P21506 573 aaPredicted RBP12.1□□□□□ -0.47
SF3B3-202ENST00000562722 PPP2R1BP30154 601 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 CHRNB4P30926 498 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 ELK3P41970 407 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 BMPR2Q13873 1038 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 TERF2Q15554 542 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 PAOXQ6QHF9 649 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 CLNKQ7Z7G1 428 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 MARVELD2Q8N4S9 558 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 NKAPQ8N5F7 415 aaKnown RBP12.1□□□□□ -0.47
SF3B3-202ENST00000562722 TTLQ8NG68 377 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 OR52N2Q8NGI0 321 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 ACTRT1Q8TDG2 376 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 CREB3L4Q8TEY5 395 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 ASB15Q8WXK1 588 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 RND1Q92730 232 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 GAL3ST3Q96A11 431 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 OSBPL9Q96SU4 736 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 DDX47Q9H0S4 455 aaKnown RBP12.1□□□□□ -0.47
SF3B3-202ENST00000562722 HPF1Q9NWY4 346 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 RNF6Q9Y252 685 aa12.1□□□□□ -0.47
SF3B3-202ENST00000562722 YARS2Q9Y2Z4 477 aaKnown RBP12.1□□□□□ -0.47
SF3B3-202ENST00000562722 ANKRD17O75179 2603 aaKnown RBP12.09□□□□□ -0.47
SF3B3-202ENST00000562722 NCF1BA6NI72 391 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms