RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 KALRNO60229 2985 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 MED13Q9UHV7 2174 aa12.69□□□□□ -0.38
CDH1-204ENST00000562118 LOC102723996A0A087X1L8 192 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 PLPP1O14494 284 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 NKX2-8O15522 239 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 ERI3O43414 337 aaKnown RBP12.68□□□□□ -0.38
CDH1-204ENST00000562118 DNAJB6O75190 326 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 OR4F21O95013 312 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 B3GALT4O96024 378 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 MMP11P24347 488 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 PTX3P26022 381 aaPredicted RBP12.68□□□□□ -0.38
CDH1-204ENST00000562118 RPS13P62277 151 aaKnown RBP12.68□□□□□ -0.38
CDH1-204ENST00000562118 KLC1Q07866 573 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 ASPHQ12797 758 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 COL9A2Q14055 689 aaPredicted RBP12.68□□□□□ -0.38
CDH1-204ENST00000562118 RBBP7Q16576 425 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 SYT16Q17RD7 645 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 FAM69BQ5VUD6 431 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 MRM1Q6IN84 353 aaKnown RBP12.68□□□□□ -0.38
CDH1-204ENST00000562118 TRIM40Q6P9F5 258 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 TMEM205Q6UW68 189 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 PPP1R32Q7Z5V6 425 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 APLFQ8IW19 511 aaPredicted RBP12.68□□□□□ -0.38
CDH1-204ENST00000562118 HOMEZQ8IX15 550 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 CA13Q8N1Q1 262 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 ZSCAN1Q8NBB4 408 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 OR5T3Q8NGG3 340 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 OR51Q1Q8NH59 317 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 PPP4R1Q8TF05 950 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 THAP4Q8WY91 577 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 COL26A1Q96A83 441 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 ARL8AQ96BM9 186 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 IP6K3Q96PC2 410 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 F2RL3Q96RI0 385 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 SERINC2Q96SA4 455 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 MTERF1Q99551 399 aaKnown RBP12.68□□□□□ -0.38
CDH1-204ENST00000562118 ROGDIQ9GZN7 287 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 DDX31Q9H8H2 851 aaKnown RBP12.68□□□□□ -0.38
CDH1-204ENST00000562118 LYRM4Q9HD34 91 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 SEMA3GQ9NS98 782 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 SIRT5Q9NXA8 310 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 KCMF1Q9P0J7 381 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 TRPC4Q9UBN4 977 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 GPN3Q9UHW5 284 aaPredicted RBP12.68□□□□□ -0.38
CDH1-204ENST00000562118 HAO1Q9UJM8 370 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 SNX6Q9UNH7 406 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 CLDN16Q9Y5I7 305 aa12.68□□□□□ -0.38
CDH1-204ENST00000562118 A0A088AWK7 358 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 IGKV3D-11A0A0A0MRZ8 115 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 A0A0A6YYD5 115 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 MANBAO00462 879 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 SOCS6O14544 535 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 CHST10O43529 356 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 TGFB1P01137 390 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 IGHEP01854 428 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 SERPIND1P05546 499 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 FGF4P08620 206 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 PCNAP12004 261 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 ZNF10P21506 573 aaPredicted RBP12.67□□□□□ -0.38
CDH1-204ENST00000562118 HIST1H1TP22492 207 aaPredicted RBP12.67□□□□□ -0.38
CDH1-204ENST00000562118 ATP5A1P25705 553 aaKnown RBP12.67□□□□□ -0.38
CDH1-204ENST00000562118 BSGP35613 385 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 FOLR3P41439 243 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 CCR10P46092 362 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 NEK2P51955 445 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 MTTPP55157 894 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 FOXA1P55317 472 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 WDR4P57081 412 aaKnown RBP12.67□□□□□ -0.38
CDH1-204ENST00000562118 FOXL2P58012 376 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 RAB8AP61006 207 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 MAGOHP61326 146 aaKnown RBP12.67□□□□□ -0.38
CDH1-204ENST00000562118 CXADRP78310 365 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 PHEXP78562 749 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 MAT1AQ00266 395 aaKnown RBP12.67□□□□□ -0.38
CDH1-204ENST00000562118 RHAGQ02094 409 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 TBL3Q12788 808 aaKnown RBP12.67□□□□□ -0.38
CDH1-204ENST00000562118 CSTF3Q12996 717 aaKnown RBP12.67□□□□□ -0.38
CDH1-204ENST00000562118 RUNX2Q13950 521 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 RCN2Q14257 317 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 UGT3A2Q3SY77 523 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 TTMPQ5BVD1 217 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 VWA2Q5GFL6 755 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 MLIPQ5VWP3 458 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 CHSY3Q70JA7 882 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 GPR155Q7Z3F1 870 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 TRIM46Q7Z4K8 759 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 MRGPREQ86SM8 312 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 LAPTM4BQ86VI4 370 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 CDYL2Q8N8U2 506 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 CCDC63Q8NA47 563 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 ADAMTS18Q8TE60 1221 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 ATP6V1E2Q96A05 226 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 MIEF2Q96C03 454 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 ATP6V1G3Q96LB4 118 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 SERPINI1Q99574 410 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 OR51B5Q9H339 312 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 FARSBQ9NSD9 589 aaKnown RBP12.67□□□□□ -0.38
CDH1-204ENST00000562118 ADAM29Q9UKF5 820 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 DAPP1Q9UN19 280 aa12.67□□□□□ -0.38
CDH1-204ENST00000562118 PTRH2Q9Y3E5 179 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms