RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 PPIL1Q9Y3C6 166 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 PCDHA3Q9Y5H8 950 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 AP1M2Q9Y6Q5 423 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 CHD3Q12873 2000 aaKnown RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 TENM1Q9UKZ4 2725 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 RYR2Q92736 4967 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.52□□□□□ -1.855e-6■■■■□ 23.8
HERC1-211ENST00000560983 HCFC1P51610 2035 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 INTS1Q8N201 2190 aaKnown RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 A0A1W2PQ72 361 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 OR6C74A6NCV1 312 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 CLCA1A8K7I4 914 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 A8MV72 311 aaPredicted RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 M0QYG6 137 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 RASGRF2O14827 1237 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 TTI1O43156 1089 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 VEGFDO43915 354 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 PRAMEF11O60813 436 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 NTN1O95631 604 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 PYGLP06737 847 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 CYP2A6P11509 494 aaPredicted RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 COX6A1P12074 109 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 KRT13P13646 458 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 ZNF7P17097 686 aaPredicted RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 HOXB6P17509 224 aaKnown RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 CTPS1P17812 591 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 POLR2CP19387 275 aaPredicted RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 NR2F2P24468 414 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 TBXAS1P24557 533 aaPredicted RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 PRDX3P30048 256 aaKnown RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 UQCRC1P31930 480 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 PEX19P40855 299 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 NR4A2P43354 598 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 ZFP36L2P47974 494 aaKnown RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 LMAN1P49257 510 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 SULT1E1P49888 294 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 STC1P52823 247 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 YBEYP58557 167 aaPredicted RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 AMPD3Q01432 767 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 GALNT3Q14435 633 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 LRRC66Q68CR7 880 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 TXNRD3NBQ6F5E7 133 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 RTL6Q6ICC9 239 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 RRAGAQ7L523 313 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 NDUFAF7Q7L592 441 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 ADGRG6Q86SQ4 1221 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 PAQR7Q86WK9 346 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 FAM131BQ86XD5 332 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 MEX3DQ86XN8 651 aaKnown RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.51□□□□□ -1.85
HERC1-211ENST00000560983 RTL3Q8N8U3 475 aaKnown RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 LMO3Q8TAP4 145 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 LINC01560Q8TB33 94 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 CCDC110Q8TBZ0 833 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 DENND1AQ8TEH3 1009 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 PIH1D2Q8WWB5 315 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 RGMAQ96B86 450 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 C8orf44Q96CB5 159 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 CXorf40BQ96DE9 158 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 NRTNQ99748 197 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 SH3GL2Q99962 352 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 TTYH2Q9BSA4 534 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 SARGQ9BW04 601 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 PITPNM3Q9BZ71 974 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 TRIM7Q9C029 511 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 OR2AG1Q9H205 316 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 SLC26A1Q9H2B4 701 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 TP63Q9H3D4 680 aaPredicted RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 LRRC19Q9H756 370 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 CATSPERBQ9H7T0 1116 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 MRM3Q9HC36 420 aaKnown RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 METTL14Q9HCE5 456 aaKnown RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 PLCB1Q9NQ66 1216 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 KLHL1Q9NR64 748 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 TAS2R14Q9NYV8 317 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 FEZ2Q9UHY8 353 aaPredicted RBP3.51□□□□□ -1.85
HERC1-211ENST00000560983 POMT2Q9UKY4 750 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 SPEF1Q9Y4P9 236 aa3.51□□□□□ -1.85
HERC1-211ENST00000560983 RYR1P21817 5038 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 A0A1W2PQ67 120 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 USP27XA6NNY8 438 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 GOLGA8SH3BPF8 625 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 CALUO43852 315 aaPredicted RBP3.5□□□□□ -1.85
HERC1-211ENST00000560983 PALMO75781 387 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 OR2B3O76000 313 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 NEURL1O76050 574 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 AHSGP02765 367 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 STATHP02808 62 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 SP1P08047 785 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 PAX1P15863 534 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 CDH3P22223 829 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 EEF1DP29692 281 aaKnown RBP3.5□□□□□ -1.85
HERC1-211ENST00000560983 CLCN2P51788 898 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 MAP2K6P52564 334 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 NR1H2P55055 460 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 AP1S1P61966 158 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 HOXA4Q00056 320 aaPredicted RBP3.5□□□□□ -1.85
HERC1-211ENST00000560983 ITKQ08881 620 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 TRAF2Q12933 501 aa3.5□□□□□ -1.85
HERC1-211ENST00000560983 IHHQ14623 411 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms