RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CLEC18CQ8NCF0 446 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 OR7G3Q8NG95 312 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMAD3-213ENST00000560175 HAS2Q92819 552 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 UBE2E3Q969T4 207 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 MS4A8Q9BY19 250 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 REXO4Q9GZR2 422 aaKnown RBP12.43□□□□□ -0.42
SMAD3-213ENST00000560175 VPS11Q9H270 941 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 CLMPQ9H6B4 373 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 ADGRE2Q9UHX3 823 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 TMCO1Q9UM00 188 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 CLDN16Q9Y5I7 305 aa12.43□□□□□ -0.42
SMAD3-213ENST00000560175 TNPO3Q9Y5L0 923 aaKnown RBP12.43□□□□□ -0.42
SMAD3-213ENST00000560175 EXOC1LA0A1B0GW35 172 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 TCRBV16S1A1N1A0A5B0 115 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 TTLL8A6PVC2 850 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 STX16-NPEPL1H3BU86 382 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 PYCARD-AS1I3L0S3 204 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 STX16O14662 325 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 SCELO95171 688 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 MYBL2P10244 700 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 SERPINB1P30740 379 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 HNF4AP41235 474 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 PIK3CBP42338 1070 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 ARFIP1P53367 373 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 OLR1P78380 273 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 BTN3A2P78410 334 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 ABRAXAS2Q15018 415 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 INPP5JQ15735 1006 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-213ENST00000560175 NSDHLQ15738 373 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 IRAK1BP1Q5VVH5 260 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 MED27Q6P2C8 311 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 CUZD1Q86UP6 607 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 LCA5Q86VQ0 697 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 TEX9Q8N6V9 391 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 AMER2Q8N7J2 671 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 SRFBP1Q8NEF9 429 aaKnown RBP12.42□□□□□ -0.42
SMAD3-213ENST00000560175 UHMK1Q8TAS1 419 aaKnown RBP12.42□□□□□ -0.42
SMAD3-213ENST00000560175 M1APQ8TC57 530 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 CPT1CQ8TCG5 803 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 MZB1Q8WU39 189 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 EXT2Q93063 718 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 MTBPQ96DY7 904 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 SERINC2Q96SA4 455 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 MRPL57Q9BQC6 102 aaKnown RBP12.42□□□□□ -0.42
SMAD3-213ENST00000560175 NTMT1Q9BV86 223 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 C1QTNF3Q9BXJ4 246 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 MFRPQ9BY79 579 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 RNF32Q9H0A6 362 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 KCMF1Q9P0J7 381 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 PPT2Q9UMR5 302 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 PLAAQ9Y263 795 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 MMACHCQ9Y4U1 282 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 CSAG2Q9Y5P2 127 aa12.42□□□□□ -0.42
SMAD3-213ENST00000560175 LRRC14BA6NHZ5 514 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 FAM227AF5H4B4 570 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 H0YIV9 168 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 CYR61O00622 381 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 CDK2AP1O14519 115 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 ERI3O43414 337 aaKnown RBP12.41□□□□□ -0.42
SMAD3-213ENST00000560175 PRMT3O60678 531 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 CELA2AP08217 269 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 ITGAMP11215 1152 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 GFAPP14136 432 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 PIK3CGP48736 1102 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 BTG2P78543 158 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 GTF2H2Q13888 395 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 EXT1Q16394 746 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 TMEM35AQ53FP2 167 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 DEPDC1Q5TB30 811 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 B3GNTL1Q67FW5 361 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-213ENST00000560175 RPUSD3Q6P087 351 aaKnown RBP12.41□□□□□ -0.42
SMAD3-213ENST00000560175 GTF2H2CQ6P1K8 395 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 TRIM40Q6P9F5 258 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 SH2D5Q6ZV89 423 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 SCUBE1Q8IWY4 988 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 ARMC10Q8N2F6 343 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 GALNT11Q8NCW6 608 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 NFAM1Q8NET5 270 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-213ENST00000560175 BRIX1Q8TDN6 353 aaKnown RBP12.41□□□□□ -0.42
SMAD3-213ENST00000560175 ELP5Q8TE02 316 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 TSLPQ969D9 159 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 F2RL3Q96RI0 385 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 TBCDQ9BTW9 1192 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 EPS8L2Q9H6S3 715 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 ZBTB26Q9HCK0 441 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 MMP25Q9NPA2 562 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 SLAMF7Q9NQ25 335 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 PRDM9Q9NQV7 894 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 DAPP1Q9UN19 280 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 PPIEQ9UNP9 301 aaKnown RBP12.41□□□□□ -0.42
SMAD3-213ENST00000560175 PCDHGA11Q9Y5H2 935 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 PCDHGA10Q9Y5H3 936 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 ESPL1Q14674 2120 aa12.41□□□□□ -0.42
SMAD3-213ENST00000560175 ASH1LQ9NR48 2969 aaKnown RBP12.41□□□□□ -0.42
SMAD3-213ENST00000560175 POLEQ07864 2286 aa12.4□□□□□ -0.42
SMAD3-213ENST00000560175 A0A088AWK7 358 aa12.4□□□□□ -0.42
SMAD3-213ENST00000560175 IGHV3-20A0A0C4DH32 117 aa12.4□□□□□ -0.42
SMAD3-213ENST00000560175 CDC123O75794 336 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-213ENST00000560175 SEC24DO94855 1032 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms