RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 RBP1P09455 135 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 TSPAN8P19075 237 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 ARL1P40616 181 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 CASP2P42575 452 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 SLCO1A2P46721 670 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 HNRNPFP52597 415 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 SKP1P63208 163 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 E2F2Q14209 437 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 PCBP2Q15366 365 aaKnown RBP eCLIP13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 TSNAXIP1Q2TAA8 658 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 LGSNQ5TDP6 509 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 FCRLBQ6BAA4 426 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 GRHL2Q6ISB3 625 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 TRIM40Q6P9F5 258 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 ABHD17CQ6PCB6 329 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 UBE3DQ7Z6J8 389 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 CYP4X1Q8N118 509 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 FAM47BQ8NA70 645 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 TMEM52Q8NDY8 209 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 OR2L5Q8NG80 312 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 OR7G3Q8NG95 312 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 ZNF473Q8WTR7 871 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 PSMF1Q92530 271 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 OR1F2PQ96R84 312 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 SORBS1Q9BX66 1292 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 MS4A8Q9BY19 250 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 PITHD1Q9GZP4 211 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 IPPKQ9H8X2 491 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 ACTR8Q9H981 624 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 NECTIN3Q9NQS3 549 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 RIC8BQ9NVN3 520 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 PLA2G3Q9NZ20 509 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 TMEM216Q9P0N5 145 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 RNF11Q9Y3C5 154 aa13.96□□□□□ -0.17
RABGGTA-211ENST00000559850 SPENQ96T58 3664 aaKnown RBP13.96□□□□□ -0.18
RABGGTA-211ENST00000559850 MYOCOSA0A1B0GUC4 107 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 A0A1W2PPM1 405 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 A8MUA0 341 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 MAGEB17A8MXT2 336 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 PSMD12O00232 456 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 OR7A17O14581 309 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 SMIM24O75264 130 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 WISP1O95388 367 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 UQCRHP07919 91 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 COL6A2P12110 1019 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 RNH1P13489 461 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 TNFRSF8P28908 595 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 OR4D2P58180 307 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 VSNL1P62760 191 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 BTBD16Q32M84 506 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 ADPRMQ3LIE5 342 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 PAPD4Q6PIY7 484 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 ZNF793Q6ZN11 406 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 LAS2Q8IYD9 372 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 TMEM151AQ8N4L1 468 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 ZADH2Q8N4Q0 377 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 PLPP5Q8NEB5 264 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 CATSPER1Q8NEC5 780 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 OR52B6Q8NGF0 335 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 MZB1Q8WU39 189 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 CNDP1Q96KN2 507 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 PTCHD1Q96NR3 888 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 CSF3RQ99062 836 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 TUBB6Q9BUF5 446 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 OR51B5Q9H339 312 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 NOL11Q9H8H0 719 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 SLAMF7Q9NQ25 335 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 PRDM7Q9NQW5 492 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 MAP10Q9P2G4 905 aa13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 PSMC3IPQ9P2W1 217 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 C19orf25Q9UFG5 118 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-211ENST00000559850 HELZ2Q9BYK8 2649 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 IQANK1A0A1B0GTG1 560 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 A0A1B0GTL3 188 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 CCDC189A1A4V9 331 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 A8MT66 165 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 A8MUI8 341 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 B3GALT2O43825 422 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 ZNF500O60304 480 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 PRMT3O60678 531 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 PYGBP11216 843 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 IL10P22301 178 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 JAK1P23458 1154 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 GSTM2P28161 218 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 NEK2P51955 445 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 FOXK1P85037 733 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 ACTN3Q08043 901 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 CPSF6Q16630 551 aaKnown RBP eCLIP13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 NIPAL1Q6NVV3 410 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 IGFL3Q6UXB1 125 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 ISLR2Q6UXK2 745 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 TIFABQ6ZNK6 161 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 CLNKQ7Z7G1 428 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 CUZD1Q86UP6 607 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 HUS1BQ8NHY5 278 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 EPS8L3Q8TE67 593 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 UBE2E3Q969T4 207 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 ATP6V1E2Q96A05 226 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 PNPLA2Q96AD5 504 aa13.94□□□□□ -0.18
RABGGTA-211ENST00000559850 MTFMTQ96DP5 389 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms