RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 OR2L5Q8NG80 312 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 TRPC4APQ8TEL6 797 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 ZNF483Q8TF39 744 aaPredicted RBP13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 GAL3ST3Q96A11 431 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 FAR2Q96K12 515 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 FER1L6-AS2Q96M78 137 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 IP6K3Q96PC2 410 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 TMEM237Q96Q45 408 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 MS4A8Q9BY19 250 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 PITHD1Q9GZP4 211 aaPredicted RBP13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 ZBTB20Q9HC78 741 aaPredicted RBP13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 ATP13A2Q9NQ11 1180 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 PRDM7Q9NQW5 492 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 ZNF225Q9UK10 706 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 TMCO1Q9UM00 188 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 PLAAQ9Y263 795 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 MYOCOSA0A1B0GUC4 107 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 MAGEB17A8MXT2 336 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 CEACAM4O75871 244 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 SUPT7LO94864 414 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 CLDN9O95484 217 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 ETHE1O95571 254 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 PROCP04070 461 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 FHP07954 510 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 GSTA1P08263 222 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 COX6A1P12074 109 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 ACPPP15309 386 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 CREB1P16220 341 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 TAC1P20366 129 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 ITGA3P26006 1051 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 HNRNPFP52597 415 aaKnown RBP13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 RRADP55042 308 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 RHAGQ02094 409 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 KCNC4Q03721 635 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 TRAF3Q13114 568 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 PCOLCEQ15113 449 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 SGO1Q5FBB7 561 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 ZNF678Q5SXM1 525 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 TMEM205Q6UW68 189 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 ZNF793Q6ZN11 406 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 ASB18Q6ZVZ8 466 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 MILR1Q7Z6M3 343 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 L3MBTL4Q8NA19 623 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 CLEC1AQ8NC01 280 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 TMEM52Q8NDY8 209 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 OR4F6Q8NGB9 312 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 WDR20Q8TBZ3 569 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 UBE2E3Q969T4 207 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 TBC1D20Q96BZ9 403 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 ZNF552Q9H707 407 aaPredicted RBP13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 TUBD1Q9UJT1 453 aa13.03□□□□□ -0.32
TSPAN3-205ENST00000558745 IGHV1-45A0A0A0MS14 117 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 PYCARD-AS1I3L0S3 204 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 COPEO14579 308 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 GLRA3O75311 464 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 SPAG7O75391 227 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 SEC24DO94855 1032 aaPredicted RBP13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 OR4F21O95013 312 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 C8orf89P0DMQ9 161 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 SFTPCP11686 197 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 IMPDH1P20839 514 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 MAOAP21397 527 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 ATP5F1P24539 256 aaPredicted RBP13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 CRHR1P34998 444 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 CLCQ05315 142 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 SLC18A2Q05940 514 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 RASA2Q15283 850 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 LACTB2Q53H82 288 aaPredicted RBP13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 DEPDC1Q5TB30 811 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 KHDRBS2Q5VWX1 349 aaKnown RBP13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 TCTN3Q6NUS6 607 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 TRIM40Q6P9F5 258 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 NDUFAF7Q7L592 441 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 ANKRD37Q7Z713 158 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 PPP4R1Q8TF05 950 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 METTL21AQ8WXB1 218 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 THOC3Q96J01 351 aaKnown RBP13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 PTCHD1Q96NR3 888 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 NTMT1Q9BV86 223 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 C1QTNF3Q9BXJ4 246 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 MFRPQ9BY79 579 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 PPCSQ9HAB8 311 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 MLXIPLQ9NP71 852 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 NECTIN3Q9NQS3 549 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 DOCK10Q96BY6 2186 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 COL6A6A6NMZ7 2263 aa13.02□□□□□ -0.33
TSPAN3-205ENST00000558745 LOC102723996A0A087X1L8 192 aa13.01□□□□□ -0.33
TSPAN3-205ENST00000558745 NSG1A0A0A6YYJ2 146 aa13.01□□□□□ -0.33
TSPAN3-205ENST00000558745 A8MUA0 341 aa13.01□□□□□ -0.33
TSPAN3-205ENST00000558745 B8ZZF3 427 aa13.01□□□□□ -0.33
TSPAN3-205ENST00000558745 H0YIV9 168 aa13.01□□□□□ -0.33
TSPAN3-205ENST00000558745 B3GALT2O43825 422 aa13.01□□□□□ -0.33
TSPAN3-205ENST00000558745 PLIN3O60664 434 aa13.01□□□□□ -0.33
TSPAN3-205ENST00000558745 RNH1P13489 461 aaKnown RBP13.01□□□□□ -0.33
TSPAN3-205ENST00000558745 ATP5A1P25705 553 aaKnown RBP13.01□□□□□ -0.33
TSPAN3-205ENST00000558745 GSTM2P28161 218 aa13.01□□□□□ -0.33
TSPAN3-205ENST00000558745 CCT5P48643 541 aa13.01□□□□□ -0.33
TSPAN3-205ENST00000558745 PRKAA2P54646 552 aa13.01□□□□□ -0.33
TSPAN3-205ENST00000558745 LIM2P55344 173 aa13.01□□□□□ -0.33
TSPAN3-205ENST00000558745 HERVK_113P63132 956 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms