RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 SSU72Q9NP77 194 aaKnown RBP13.56□□□□□ -0.24
USP3-205ENST00000557884 MID1IP1Q9NPA3 183 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 FARSBQ9NSD9 589 aaKnown RBP13.56□□□□□ -0.24
USP3-205ENST00000557884 ADGRE2Q9UHX3 823 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 C3orf18Q9UK00 162 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 ACTL7BQ9Y614 415 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 ZFYVE26Q68DK2 2539 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 OR2W5A6NFC9 320 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 B3GALT2O43825 422 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 CDC123O75794 336 aaPredicted RBP13.55□□□□□ -0.24
USP3-205ENST00000557884 BMP10O95393 424 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 ETHE1O95571 254 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 HEXBP07686 556 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 BPGMP07738 259 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 HPDP32754 393 aaPredicted RBP13.55□□□□□ -0.24
USP3-205ENST00000557884 ETV4P43268 484 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 SERPINB4P48594 390 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 RAP1GDS1P52306 607 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 PKNOX1P55347 436 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 ATP1A4Q13733 1029 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 TBR1Q16650 682 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 MINDY4Q4G0A6 757 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 TMEM35AQ53FP2 167 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 DEPDC1Q5TB30 811 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 KHDRBS2Q5VWX1 349 aaKnown RBP13.55□□□□□ -0.24
USP3-205ENST00000557884 FAAH2Q6GMR7 532 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 CHSY3Q70JA7 882 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 PPP1R32Q7Z5V6 425 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 MRGPREQ86SM8 312 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 RAB43Q86YS6 212 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 METTL6Q8TCB7 284 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 ADAMTS17Q8TE56 1095 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 AGAP11Q8TF27 550 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 SELENOMQ8WWX9 145 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 EXTL1Q92935 676 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 ARL8AQ96BM9 186 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 MAGEB10Q96LZ2 347 aaPredicted RBP13.55□□□□□ -0.24
USP3-205ENST00000557884 QRFPRQ96P65 431 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 KCNC2Q96PR1 638 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 MESP1Q9BRJ9 268 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 MLXIPLQ9NP71 852 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 C14orf105Q9NVL8 296 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 MKL2Q9ULH7 1088 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 SNX6Q9UNH7 406 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 POLHQ9Y253 713 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 MAN2B2Q9Y2E5 1009 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 STK38LQ9Y2H1 464 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 TSC22D4Q9Y3Q8 395 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 TIMM22Q9Y584 194 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 SEC16AO15027 2179 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 ATMQ13315 3056 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 CACNA1BQ00975 2339 aa13.55□□□□□ -0.24
USP3-205ENST00000557884 MDC1Q14676 2089 aaKnown RBP13.54□□□□□ -0.24
USP3-205ENST00000557884 A0A088AWK7 358 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 UQCRHLA0A096LP55 91 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 IDSB3KWA1 339 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 FOXE1O00358 373 aaPredicted RBP13.54□□□□□ -0.24
USP3-205ENST00000557884 MANBAO00462 879 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 B4GALT2O60909 372 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 CRCPO75575 148 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 ESRRBO95718 433 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 PDYNP01213 254 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 UQCRHP07919 91 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 ZNF10P21506 573 aaPredicted RBP13.54□□□□□ -0.24
USP3-205ENST00000557884 PTX3P26022 381 aaPredicted RBP13.54□□□□□ -0.24
USP3-205ENST00000557884 HMOX2P30519 316 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 SSR2P43308 183 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 HTR6P50406 440 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 EFNA3P52797 238 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 EMP2P54851 167 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 MTTPP55157 894 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 FOXA1P55317 472 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 ASPHQ12797 758 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 RUNX2Q13950 521 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 SSPNQ14714 243 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 CRTC2Q53ET0 693 aaPredicted RBP13.54□□□□□ -0.24
USP3-205ENST00000557884 CPZQ66K79 652 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 NIPAL1Q6NVV3 410 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 ZNF793Q6ZN11 406 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 NUDCD3Q8IVD9 361 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 CA13Q8N1Q1 262 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 MGARPQ8TDB4 240 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 RGMAQ96B86 450 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 TBC1D20Q96BZ9 403 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 TLCD1Q96CP7 247 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 PAIP2Q9BPZ3 127 aaKnown RBP13.54□□□□□ -0.24
USP3-205ENST00000557884 CENPKQ9BS16 269 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 SLC29A3Q9BZD2 475 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 TGIF2Q9GZN2 237 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 VN1R1Q9GZP7 353 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 TNFRSF12AQ9NP84 129 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 PRDM7Q9NQW5 492 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 FER1L5A0AVI2 2057 aa13.54□□□□□ -0.24
USP3-205ENST00000557884 TMEM120BA0PK00 339 aa13.53□□□□□ -0.24
USP3-205ENST00000557884 ARGFXA6NJG6 315 aa13.53□□□□□ -0.24
USP3-205ENST00000557884 FAM227AF5H4B4 570 aa13.53□□□□□ -0.24
USP3-205ENST00000557884 MASP2O00187 686 aa13.53□□□□□ -0.24
USP3-205ENST00000557884 PSMD12O00232 456 aaPredicted RBP13.53□□□□□ -0.24
USP3-205ENST00000557884 PLPP1O14494 284 aa13.53□□□□□ -0.24
USP3-205ENST00000557884 TM9SF1O15321 606 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms