RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 BCKDHBP21953 392 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 CXCR2P25025 360 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 PTX3P26022 381 aaPredicted RBP7.04□□□□□ -1.28
SPG11-204ENST00000557866 CD27P26842 260 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 MAOBP27338 520 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 NDUFS1P28331 727 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 BCL6P41182 706 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 GZMMP51124 257 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 EEFSECP57772 596 aaKnown RBP7.04□□□□□ -1.28
SPG11-204ENST00000557866 SESN3P58005 492 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 OR4D2P58180 307 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 MTPNP58546 118 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 AP2B1P63010 937 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 MRPS22P82650 360 aaKnown RBP7.04□□□□□ -1.28
SPG11-204ENST00000557866 C1orf61Q13536 156 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 ZIC1Q15915 447 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 FXNQ16595 210 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 MAPKAPK3Q16644 382 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 MPEG1Q2M385 716 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 PGS1Q32NB8 556 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 SPIN4Q56A73 249 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 RUNDC3AQ59EK9 446 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 LRIF1Q5T3J3 769 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 DEPDC1Q5TB30 811 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 KIAA1614Q5VZ46 1190 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 OR4F3Q6IEY1 312 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 FAM71E1Q6IPT2 247 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 ZNF425Q6IV72 752 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 DNAJC14Q6Y2X3 702 aaPredicted RBP7.04□□□□□ -1.28
SPG11-204ENST00000557866 LRRC74BQ6ZQY2 392 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 PRR23BQ6ZRT6 265 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 ZNF551Q7Z340 670 aaPredicted RBP7.04□□□□□ -1.28
SPG11-204ENST00000557866 SLC9B2Q86UD5 537 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 SPATA24Q86W54 205 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 ANKRD46Q86W74 232 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 AMIGO1Q86WK6 493 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 KBTBD2Q8IY47 623 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 UBALD2Q8IYN6 164 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 PHACTR4Q8IZ21 702 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 ADGRF3Q8IZF5 1079 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 FAM9CQ8IZT9 166 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 MMP21Q8N119 569 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 LILRA2Q8N149 483 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 C10orf111Q8N326 155 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 RAB42Q8N4Z0 105 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 AMER3Q8N944 861 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 OR2L3Q8NG85 312 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 OR8J3Q8NGG0 315 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 OR8J2Q8NGG1 315 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 FAM110BQ8TC76 370 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 C16orf78Q8WTQ4 265 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 LCN9Q8WX39 176 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 MIEF2Q96C03 454 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 ANKRD27Q96NW4 1050 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 F2RL3Q96RI0 385 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 CPPED1Q9BRF8 314 aaPredicted RBP7.04□□□□□ -1.28
SPG11-204ENST00000557866 REXO4Q9GZR2 422 aaKnown RBP7.04□□□□□ -1.28
SPG11-204ENST00000557866 KCNH6Q9H252 994 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 MRPS30Q9NP92 439 aaKnown RBP7.04□□□□□ -1.28
SPG11-204ENST00000557866 CD320Q9NPF0 282 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 OR6C2Q9NZP2 312 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 ATP6V1HQ9UI12 483 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 MUTYHQ9UIF7 546 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 KLHL20Q9Y2M5 609 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 PCDHB14Q9Y5E9 798 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 A0A096LPI6 279 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 C15orf38-AP3S2A0A0A6YYH1 394 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 TRBC2A0A5B9 178 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 ANKDD1BA6NHY2 528 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 HAT1O14929 419 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 ARPC2O15144 300 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 OR1F1O43749 312 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 ERN1O75460 977 aaKnown RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 SEMA3DO95025 777 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 KCNH1O95259 989 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 MED26O95402 600 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 STATHP02808 62 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 GSNP06396 782 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 COX7A2P14406 83 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 NCK1P16333 377 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 EFNA1P20827 205 aaPredicted RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 HRH2P25021 359 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 HTR1EP28566 365 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 TPP2P29144 1249 aaPredicted RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 SHMT2P34897 504 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 BSGP35613 385 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 KIR3DL1P43629 444 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 ASMTP46597 345 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 RPS9P46781 194 aaKnown RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 HNRNPFP52597 415 aaKnown RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 ABATP80404 500 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 MC1RQ01726 317 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 ILF3Q12906 894 aaKnown RBP eCLIP7.03□□□□□ -1.28
SPG11-204ENST00000557866 MUM1Q2TAK8 710 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 SPATS1Q496A3 300 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 WLSQ5T9L3 541 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 KHDRBS2Q5VWX1 349 aaKnown RBP7.03□□□□□ -1.28
SPG11-204ENST00000557866 LCN8Q6JVE9 175 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 CYP2R1Q6VVX0 501 aa7.03□□□□□ -1.28
SPG11-204ENST00000557866 MSANTD1Q6ZTZ1 278 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms