RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 RAB40ALP0C0E4 278 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 RFPL3SP0C7P2 107 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 VPREB1P12018 145 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 NCF2P19878 526 aaPredicted RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 HNF1AP20823 631 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 PAICSP22234 425 aaKnown RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 ALDH1B1P30837 517 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 HOXC9P31274 260 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 DLSTP36957 453 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 CETN2P41208 172 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 OR3A1P47881 315 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 LEPRP48357 1165 aaKnown RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 SLC1A6P48664 564 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 RGS4P49798 205 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 CRYBB1P53674 252 aaPredicted RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 CLDN8P56748 225 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 MYL6P60660 151 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 CSNK2BP67870 215 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 MRPS34P82930 218 aaKnown RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 SORDQ00796 357 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 RHAGQ02094 409 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 ARHGAP1Q07960 439 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 PDIA5Q14554 519 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 STXBP2Q15833 593 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 AANATQ16613 207 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 SOWAHAQ2M3V2 549 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 C2orf68Q2NKX9 166 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 KLHL40Q2TBA0 621 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 ANXA2RQ3ZCQ2 193 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 HIKESHIQ53FT3 197 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 PDLIM3Q53GG5 364 aaPredicted RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 DCAF6Q58WW2 860 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 C6orf141Q5SZD1 244 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 AGBL2Q5U5Z8 902 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 LRRC38Q5VT99 294 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 TTC19Q6DKK2 380 aaPredicted RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 OR7E24Q6IFN5 339 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 C6orf89Q6UWU4 347 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 BTNL8Q6UX41 500 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 B3GLCTQ6Y288 498 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 PAQR9Q6ZVX9 377 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 CREB3L2Q70SY1 520 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 NRARPQ7Z6K4 114 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 TBC1D26Q86UD7 250 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 TRIM74Q86UV6 250 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 TRIM73Q86UV7 250 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 TMEM126BQ8IUX1 230 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 MISPQ8IVT2 679 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 NKAIN4Q8IVV8 208 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 LAX1Q8IWV1 398 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 SPAG16Q8N0X2 631 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 ZCCHC9Q8N567 271 aaKnown RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 BBS1Q8NFJ9 593 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 OR4A16Q8NH70 328 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 SAP25Q8TEE9 199 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 TRIB2Q92519 343 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 ANKRD7Q92527 254 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 ULK4Q96C45 1275 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 RTP4Q96DX8 246 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 DHTKD1Q96HY7 919 aaPredicted RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 C12orf66Q96MD2 445 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 RPRD1AQ96P16 312 aaPredicted RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 BTBD9Q96Q07 612 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 EPYCQ99645 322 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 CITED1Q99966 193 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 RTP3Q9BQQ7 232 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 C11orf70Q9BRQ4 267 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 ATG101Q9BSB4 218 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 ALG12Q9BV10 488 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 FICDQ9BVA6 458 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 NUP58Q9BVL2 599 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 CRNKL1Q9BZJ0 848 aaKnown RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 TRPV6Q9H1D0 765 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 SLC26A1Q9H2B4 701 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 DPEP3Q9H4B8 488 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 UPF2Q9HAU5 1272 aaKnown RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 CYP3A43Q9HB55 503 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 CHMP1AQ9HD42 196 aaPredicted RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 NRBP2Q9NSY0 501 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 RNF146Q9NTX7 359 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 FAM120CQ9NX05 1096 aaKnown RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 RDH8Q9NYR8 311 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 CHMP5Q9NZZ3 219 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 THEGQ9P2T0 379 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 GAB2Q9UQC2 676 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 MRPS33Q9Y291 106 aaKnown RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 CARD8Q9Y2G2 431 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 PTGDR2Q9Y5Y4 395 aa3.11□□□□□ -1.91
FOXN3-217ENST00000557572 DDX49Q9Y6V7 483 aaKnown RBP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 SF3B1O75533 1304 aaKnown RBP eCLIP3.11□□□□□ -1.91
FOXN3-217ENST00000557572 A0A087X0K7 114 aa3.1□□□□□ -1.91
FOXN3-217ENST00000557572 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.1□□□□□ -1.91
FOXN3-217ENST00000557572 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.1□□□□□ -1.91
FOXN3-217ENST00000557572 KANSL1LA0AUZ9 987 aa3.1□□□□□ -1.91
FOXN3-217ENST00000557572 SUPT3HB4E1H0 165 aa3.1□□□□□ -1.91
FOXN3-217ENST00000557572 SLC28A1O00337 649 aa3.1□□□□□ -1.91
FOXN3-217ENST00000557572 SLC22A2O15244 555 aa3.1□□□□□ -1.91
FOXN3-217ENST00000557572 FLRT2O43155 660 aa3.1□□□□□ -1.91
FOXN3-217ENST00000557572 NDUFS4O43181 175 aa3.1□□□□□ -1.91
FOXN3-217ENST00000557572 DFNA5O60443 496 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms