RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 TEX19Q8NA77 164 aa7.88□□□□□ -1.15
PSEN1-223ENST00000557511 C7orf57Q8NEG2 295 aa7.88□□□□□ -1.15
PSEN1-223ENST00000557511 ADAMTS17Q8TE56 1095 aa7.88□□□□□ -1.15
PSEN1-223ENST00000557511 ADAMTS18Q8TE60 1221 aa7.88□□□□□ -1.15
PSEN1-223ENST00000557511 SREK1Q8WXA9 508 aaKnown RBP7.88□□□□□ -1.15
PSEN1-223ENST00000557511 WDR34Q96EX3 536 aa7.88□□□□□ -1.15
PSEN1-223ENST00000557511 CMTM7Q96FZ5 175 aa7.88□□□□□ -1.15
PSEN1-223ENST00000557511 GPR78Q96P69 363 aa7.88□□□□□ -1.15
PSEN1-223ENST00000557511 ROPN1BQ9BZX4 212 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-223ENST00000557511 REXO4Q9GZR2 422 aaKnown RBP7.88□□□□□ -1.15
PSEN1-223ENST00000557511 RHBGQ9H310 441 aa7.88□□□□□ -1.15
PSEN1-223ENST00000557511 IPPKQ9H8X2 491 aa7.88□□□□□ -1.15
PSEN1-223ENST00000557511 ROPN1Q9HAT0 212 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-223ENST00000557511 ZNF71Q9NQZ8 489 aaPredicted RBP7.88□□□□□ -1.15
PSEN1-223ENST00000557511 RIC8BQ9NVN3 520 aa7.88□□□□□ -1.15
PSEN1-223ENST00000557511 GPR83Q9NYM4 423 aa7.88□□□□□ -1.15
PSEN1-223ENST00000557511 FBXL4Q9UKA2 621 aa7.88□□□□□ -1.15
PSEN1-223ENST00000557511 GRID1Q9ULK0 1009 aa7.88□□□□□ -1.15
PSEN1-223ENST00000557511 MRPS2Q9Y399 296 aaKnown RBP7.88□□□□□ -1.15
PSEN1-223ENST00000557511 PTPRQQ9UMZ3 2332 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 A0A1W2PNR3 127 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 ZNF860A6NHJ4 632 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 FFAR3O14843 346 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 GPR42O15529 346 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 KLK8O60259 260 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 DPM1O60762 260 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 CNOT3O75175 753 aaKnown RBP7.87□□□□□ -1.15
PSEN1-223ENST00000557511 ALOX12BO75342 701 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 SUPT7LO94864 414 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 BMP10O95393 424 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 MED26O95402 600 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 OTCP00480 354 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 HPP00738 406 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 SHBGP04278 402 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 FHP07954 510 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 MYL2P10916 166 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 MTHFD2P13995 350 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 ATP5F1P24539 256 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-223ENST00000557511 DEKP35659 375 aaKnown RBP7.87□□□□□ -1.15
PSEN1-223ENST00000557511 CSRP3P50461 194 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 PLA2G16P53816 162 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 MTTPP55157 894 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 NAA20P61599 178 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 ASPHQ12797 758 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 IFT88Q13099 833 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 RASA2Q15283 850 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 CPSF6Q16630 551 aaKnown RBP eCLIP7.87□□□□□ -1.15
PSEN1-223ENST00000557511 SYT16Q17RD7 645 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 CCDC153Q494R4 210 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 TMEM35AQ53FP2 167 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 C10orf62Q5T681 223 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-223ENST00000557511 FAM69BQ5VUD6 431 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 CPZQ66K79 652 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 FAAH2Q6GMR7 532 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 TCTN3Q6NUS6 607 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 NDUFAF7Q7L592 441 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 GOLGA7Q7Z5G4 137 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 PPP1R32Q7Z5V6 425 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 MILR1Q7Z6M3 343 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 CROCCP2Q86T23 111 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 ZNF605Q86T29 641 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 KBTBD2Q8IY47 623 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 GALNT16Q8N428 558 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 AFAP1L2Q8N4X5 818 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 AMER3Q8N944 861 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 OR2L5Q8NG80 312 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 UTP15Q8TED0 518 aaKnown RBP7.87□□□□□ -1.15
PSEN1-223ENST00000557511 CAVIN3Q969G5 261 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 TBC1D20Q96BZ9 403 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 MOCOSQ96EN8 888 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 PEX11GQ96HA9 241 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 BBC3Q96PG8 261 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-223ENST00000557511 KCNC2Q96PR1 638 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 SERINC2Q96SA4 455 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 TBCDQ9BTW9 1192 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 NPLQ9BXD5 320 aaPredicted RBP7.87□□□□□ -1.15
PSEN1-223ENST00000557511 PARD6BQ9BYG5 372 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 SPNS1Q9H2V7 528 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 ELOVL6Q9H5J4 265 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 EPS8L2Q9H6S3 715 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 NOL11Q9H8H0 719 aaKnown RBP7.87□□□□□ -1.15
PSEN1-223ENST00000557511 NMRK1Q9NWW6 199 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 COPG2Q9UBF2 871 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 PCDHGA9Q9Y5G4 932 aaKnown RBP7.87□□□□□ -1.15
PSEN1-223ENST00000557511 HS3ST3B1Q9Y662 390 aa7.87□□□□□ -1.15
PSEN1-223ENST00000557511 LRIT2A6NDA9 550 aa7.86□□□□□ -1.15
PSEN1-223ENST00000557511 A8MT66 165 aa7.86□□□□□ -1.15
PSEN1-223ENST00000557511 B8ZZF3 427 aa7.86□□□□□ -1.15
PSEN1-223ENST00000557511 CHST10O43529 356 aa7.86□□□□□ -1.15
PSEN1-223ENST00000557511 PRMT3O60678 531 aa7.86□□□□□ -1.15
PSEN1-223ENST00000557511 B4GALT2O60909 372 aa7.86□□□□□ -1.15
PSEN1-223ENST00000557511 CRCPO75575 148 aa7.86□□□□□ -1.15
PSEN1-223ENST00000557511 DNAJB5O75953 348 aa7.86□□□□□ -1.15
PSEN1-223ENST00000557511 SIX3O95343 332 aaPredicted RBP7.86□□□□□ -1.15
PSEN1-223ENST00000557511 MLYCDO95822 493 aa7.86□□□□□ -1.15
PSEN1-223ENST00000557511 TGFB1P01137 390 aa7.86□□□□□ -1.15
PSEN1-223ENST00000557511 NUDT17P0C025 328 aa7.86□□□□□ -1.15
PSEN1-223ENST00000557511 MYZAPP0CAP1 466 aa7.86□□□□□ -1.15
PSEN1-223ENST00000557511 KRT4P19013 534 aa7.86□□□□□ -1.15
PSEN1-223ENST00000557511 PTX3P26022 381 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms