RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 TMEM214Q6NUQ4 689 aaKnown RBP8.61□□□□□ -1.03
NEDD1-211ENST00000557454 ABHD17CQ6PCB6 329 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 TTC23LQ6PF05 361 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 SUSD1Q6UWL2 747 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 VN1R4Q7Z5H5 301 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 ADCK2Q7Z695 626 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 RASGEF1CQ8N431 466 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 RAB42Q8N4Z0 105 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 MCUQ8NE86 351 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 LKAAEAR1Q8TD35 194 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 RAD51AP1Q96B01 352 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 TBC1D20Q96BZ9 403 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 ZNF696Q9H7X3 374 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 MRPL47Q9HD33 250 aaKnown RBP8.61□□□□□ -1.03
NEDD1-211ENST00000557454 ACKR4Q9NPB9 350 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 SAMD15Q9P1V8 674 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 KCNS2Q9ULS6 477 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 RUVBL2Q9Y230 463 aaKnown RBP8.61□□□□□ -1.03
NEDD1-211ENST00000557454 NAALAD2Q9Y3Q0 740 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 PCDHA13Q9Y5I0 950 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 MALRD1Q5VYJ5 2156 aa8.61□□□□□ -1.03
NEDD1-211ENST00000557454 DOCK7Q96N67 2140 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 TCRBV16S1A1N1A0A5B0 115 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 FAM234BA2RU67 622 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 WWP2O00308 870 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 KPNA5O15131 536 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 TMPRSS2O15393 492 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 KIAA0513O60268 411 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 GPC4O75487 556 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 C1orf105O95561 183 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 CRTAMO95727 393 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 SOD3P08294 240 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 OR56A5P0C7T3 313 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 HNF1AP20823 631 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 IL10P22301 178 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 DPP4P27487 766 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 RPA3P35244 121 aaPredicted RBP8.6□□□□□ -1.03
NEDD1-211ENST00000557454 DIO3P55073 304 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 OLR1P78380 273 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 BTG2P78543 158 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 WASHC5Q12768 1159 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 MPP3Q13368 585 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 HADHQ16836 314 aaKnown RBP8.6□□□□□ -1.03
NEDD1-211ENST00000557454 PACS1Q6VY07 963 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 C22orf34Q6ZV56 151 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 MAP7D3Q8IWC1 876 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 PM20D2Q8IYS1 436 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 GCNT2Q8N0V5 402 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 LRRC25Q8N386 305 aaPredicted RBP8.6□□□□□ -1.03
NEDD1-211ENST00000557454 LRRC17Q8N6Y2 441 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 GOLM1Q8NBJ4 401 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 FBXO15Q8NCQ5 510 aaPredicted RBP8.6□□□□□ -1.03
NEDD1-211ENST00000557454 SLC44A1Q8WWI5 657 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 NCLNQ969V3 563 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 INTS12Q96CB8 462 aaKnown RBP8.6□□□□□ -1.03
NEDD1-211ENST00000557454 VMP1Q96GC9 406 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 RNF157Q96PX1 679 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 FAM111AQ96PZ2 611 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 FCRL5Q96RD9 977 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 SLC30A3Q99726 388 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 CCDC77Q9BR77 488 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 RHNO1Q9BSD3 238 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 PIGMQ9H3S5 423 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 ZNHIT6Q9NWK9 470 aaKnown RBP8.6□□□□□ -1.03
NEDD1-211ENST00000557454 KLHL8Q9P2G9 620 aaPredicted RBP8.6□□□□□ -1.03
NEDD1-211ENST00000557454 TAC3Q9UHF0 121 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 ANAPC7Q9UJX3 599 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 GDF2Q9UK05 429 aaPredicted RBP8.6□□□□□ -1.03
NEDD1-211ENST00000557454 PACSIN3Q9UKS6 424 aa8.6□□□□□ -1.03
NEDD1-211ENST00000557454 IGKV3D-11A0A0A0MRZ8 115 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 OR1I1O60431 355 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 ZFAND5O76080 213 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 THBS1P07996 1170 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 JAK1P23458 1154 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 UGT2B10P36537 528 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 CD79BP40259 229 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 SLCO1A2P46721 670 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 KCNJ2P63252 427 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 MEF2AQ02078 507 aaPredicted RBP8.59□□□□□ -1.03
NEDD1-211ENST00000557454 LOXL1Q08397 574 aaPredicted RBP8.59□□□□□ -1.03
NEDD1-211ENST00000557454 ITIH4Q14624 930 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 SF3B4Q15427 424 aaKnown RBP eCLIP8.59□□□□□ -1.032e-9■■■□□ 16.5
NEDD1-211ENST00000557454 DCST1Q5T197 706 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 ICE2Q659A1 982 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 TREML4Q6UXN2 200 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 QSOX2Q6ZRP7 698 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 SH2D5Q6ZV89 423 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 SYDE1Q6ZW31 735 aaPredicted RBP8.59□□□□□ -1.03
NEDD1-211ENST00000557454 KCT2Q8NC54 265 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 RAPGEF5Q92565 580 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 AKAP1Q92667 903 aaKnown RBP eCLIP8.59□□□□□ -1.03
NEDD1-211ENST00000557454 HS6ST2Q96MM7 605 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 CALHM2Q9HA72 323 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 EML4Q9HC35 981 aaKnown RBP8.59□□□□□ -1.03
NEDD1-211ENST00000557454 ZFP64Q9NPA5 681 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 NECTIN3Q9NQS3 549 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 UTP6Q9NYH9 597 aaKnown RBP8.59□□□□□ -1.03
NEDD1-211ENST00000557454 SPATA7Q9P0W8 599 aa8.59□□□□□ -1.03
NEDD1-211ENST00000557454 MYOTQ9UBF9 498 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms