RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 NPIPA2E9PIF3 369 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 NPIPA3F8WFD2 350 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 FCHO1O14526 889 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 AHSGP02765 367 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 HIST1H2AGP0C0S8 130 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-210ENST00000557431 RNH1P13489 461 aaKnown RBP13.13□□□□□ -0.31
SLIRP-210ENST00000557431 IGFBP2P18065 325 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 HIST1H2ADP20671 130 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 CAPN3P20807 821 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 IL10P22301 178 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 CCND1P24385 295 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 TRHRP34981 398 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-210ENST00000557431 ART1P52961 327 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 TFF3Q07654 80 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 PDAP1Q13442 181 aaKnown RBP13.13□□□□□ -0.31
SLIRP-210ENST00000557431 PWP1Q13610 501 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 SNTB1Q13884 538 aaKnown RBP13.13□□□□□ -0.31
SLIRP-210ENST00000557431 CSHL1Q14406 222 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 MSS51Q4VC12 460 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 HP1BP3Q5SSJ5 553 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-210ENST00000557431 DUPD1Q68J44 220 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 CCDC137Q6PK04 289 aaKnown RBP13.13□□□□□ -0.31
SLIRP-210ENST00000557431 ABHD13Q7L211 337 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 TMEM200AQ86VY9 491 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 IGDCC3Q8IVU1 814 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 TMEM156Q8N614 296 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 GPATCH11Q8N954 259 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 OR5M9Q8NGP3 310 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 NCLNQ969V3 563 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 SEC16BQ96JE7 1060 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 HIST1H2AHQ96KK5 128 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 HIST1H2AJQ99878 128 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 H2AFJQ9BTM1 129 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 SARGQ9BW04 601 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 SLC6A16Q9GZN6 736 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 PRDM9Q9NQV7 894 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 ZFP69BQ9UJL9 534 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 PSMD12O00232 456 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-210ENST00000557431 TOXO94900 526 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 NADKO95544 446 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-210ENST00000557431 SMIM10L1P0DMW3 83 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 CLCN2P51788 898 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 PMPCAQ10713 525 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 RUNX2Q13950 521 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 ZNF460Q14592 562 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 HECTD2Q5U5R9 776 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 LRRC8EQ6NSJ5 796 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 CLNKQ7Z7G1 428 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 LMNTD2Q8IXW0 634 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 FAM47BQ8NA70 645 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 B3GNT7Q8NFL0 401 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 C16orf52Q8NHV5 167 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 FBXL8Q96CD0 374 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 SMIM10Q96HG1 83 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 PLAC1Q9HBJ0 212 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 SLC22A14Q9Y267 594 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 CLDN16Q9Y5I7 305 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 ABCA4P78363 2273 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 MED12Q93074 2177 aa13.12□□□□□ -0.31
SLIRP-210ENST00000557431 NPEPPSL1A6NEC2 478 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 KLRC4-KLRK1H3BQV0 150 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 FANCGO15287 622 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 PGAM1P18669 254 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 SAT1P21673 171 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 BTN3A2P78410 334 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 PLGLB1Q02325 96 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 ZNF750Q32MQ0 723 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 XKR6Q5GH73 641 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 ADNP2Q6IQ32 1131 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 SBSNQ6UWP8 590 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 IL20RBQ6UXL0 311 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 THOC6Q86W42 341 aaKnown RBP13.11□□□□□ -0.31
SLIRP-210ENST00000557431 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.11□□□□□ -0.31
SLIRP-210ENST00000557431 ZNF321PQ8N8H1 164 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 ZFP62Q8NB50 900 aaPredicted RBP13.11□□□□□ -0.31
SLIRP-210ENST00000557431 POGLUT1Q8NBL1 392 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 OR5M3Q8NGP4 307 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 CREB3L4Q8TEY5 395 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 CCT6BQ92526 530 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 RND1Q92730 232 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 CFAP36Q96G28 342 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 PWWP2AQ96N64 755 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 FAM129AQ9BZQ8 928 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 TP63Q9H3D4 680 aaPredicted RBP13.11□□□□□ -0.31
SLIRP-210ENST00000557431 PRTFDC1Q9NRG1 225 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 HOMER3Q9NSC5 361 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 PNPLA3Q9NST1 481 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 ERVK-11Q9UQG0 969 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 DYRK1BQ9Y463 629 aa13.11□□□□□ -0.31
SLIRP-210ENST00000557431 DOCK7Q96N67 2140 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 ITPR3Q14573 2671 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 ACANP16112 2415 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 PABPN1LA6NDY0 278 aaKnown RBP13.1□□□□□ -0.31
SLIRP-210ENST00000557431 TMEM200CA6NKL6 621 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 WWP2O00308 870 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 CDC7O00311 574 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 OR2J2O76002 312 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 OR6B1O95007 311 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 CCDC175P0C221 793 aa13.1□□□□□ -0.31
SLIRP-210ENST00000557431 MSX1P28360 303 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms