RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 KCMF1Q9P0J7 381 aa13.8□□□□□ -0.2
CHD8-211ENST00000556833 ZFATQ9P243 1243 aa13.8□□□□□ -0.2
CHD8-211ENST00000556833 ASIC3Q9UHC3 531 aa13.8□□□□□ -0.2
CHD8-211ENST00000556833 ZFP69BQ9UJL9 534 aa13.8□□□□□ -0.2
CHD8-211ENST00000556833 KLF13Q9Y2Y9 288 aaPredicted RBP13.8□□□□□ -0.2
CHD8-211ENST00000556833 A0A0G2JMM0 328 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 A0A1W2PPB8 328 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 A0A1W2PRS3 328 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 TCRBV16S1A1N1A0A5B0 115 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 KIR3DP1A8MWS1 328 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 TGFBR3LH3BV60 316 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 CDC7O00311 574 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 ITGA10O75578 1167 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 KRT38O76015 456 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 TFEBP19484 476 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 HNRNPFP52597 415 aaKnown RBP13.79□□□□□ -0.2
CHD8-211ENST00000556833 SKP1P63208 163 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 CMPK2Q5EBM0 449 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 TRMT10BQ6PF06 316 aaKnown RBP13.79□□□□□ -0.2
CHD8-211ENST00000556833 THOC6Q86W42 341 aaKnown RBP13.79□□□□□ -0.2
CHD8-211ENST00000556833 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHD8-211ENST00000556833 RASGEF1CQ8N431 466 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 TMEM52Q8NDY8 209 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 FAM57AQ8TBR7 257 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 PHF10Q8WUB8 498 aaKnown RBP13.79□□□□□ -0.2
CHD8-211ENST00000556833 NCLNQ969V3 563 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 CERS2Q96G23 380 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 FAM129AQ9BZQ8 928 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 SLC6A16Q9GZN6 736 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 ZNF223Q9UK11 482 aaPredicted RBP13.79□□□□□ -0.2
CHD8-211ENST00000556833 CHMP2BQ9UQN3 213 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 SLC22A14Q9Y267 594 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 PPP2R2CQ9Y2T4 447 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 PHF3Q92576 2039 aaKnown RBP13.79□□□□□ -0.2
CHD8-211ENST00000556833 NF1P21359 2839 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 ZFHX3Q15911 3703 aa13.79□□□□□ -0.2
CHD8-211ENST00000556833 IGKV3D-11A0A0A0MRZ8 115 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 PINLYPA6NC86 204 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 PGRMC1O00264 195 aaKnown RBP13.78□□□□□ -0.2
CHD8-211ENST00000556833 AP1S2P56377 157 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 PLGLB1Q02325 96 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 FBXO48Q5FWF7 155 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 SPANXN3Q5MJ09 141 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 NXPE4Q6UWF7 544 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 SBSNQ6UWP8 590 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 APCDD1LQ8NCL9 501 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 ARMC2Q8NEN0 867 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 OR5M9Q8NGP3 310 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 NRGNQ92686 78 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 EGFL8Q99944 293 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 SPOCK3Q9BQ16 436 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 AIF1LQ9BQI0 150 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 MCCC2Q9HCC0 563 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 NPDC1Q9NQX5 325 aaPredicted RBP13.78□□□□□ -0.2
CHD8-211ENST00000556833 DEPPQ9NTK1 212 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 TNFRSF10DQ9UBN6 386 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 ERVK-11Q9UQG0 969 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 RNF6Q9Y252 685 aa13.78□□□□□ -0.2
CHD8-211ENST00000556833 NCF1BA6NI72 391 aaPredicted RBP13.77□□□□□ -0.21
CHD8-211ENST00000556833 NCF1CA8MVU1 366 aaPredicted RBP13.77□□□□□ -0.21
CHD8-211ENST00000556833 KLRC4-KLRK1H3BQV0 150 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 NCF1P14598 390 aaPredicted RBP13.77□□□□□ -0.21
CHD8-211ENST00000556833 HNRNPH1P31943 449 aaKnown RBP13.77□□□□□ -0.21
CHD8-211ENST00000556833 TRHRP34981 398 aaPredicted RBP13.77□□□□□ -0.21
CHD8-211ENST00000556833 AHRP35869 848 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 GDF5P43026 501 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 CLCN2P51788 898 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 CCZ1BP86790 482 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 CCZ1P86791 482 aaPredicted RBP13.77□□□□□ -0.21
CHD8-211ENST00000556833 AKAP6Q13023 2319 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 SLC13A2Q13183 592 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 RUNX2Q13950 521 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 ITPR3Q14573 2671 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 CYP1B1Q16678 543 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 TEDDM1Q5T9Z0 273 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 IL20RBQ6UXL0 311 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 ZNF662Q6ZS27 426 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 TMEM200AQ86VY9 491 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 B3GNT7Q8NFL0 401 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 CREB3L4Q8TEY5 395 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 ATL1Q8WXF7 558 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 C14orf79Q96F83 325 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 PBKQ96KB5 322 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 SARGQ9BW04 601 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 ENKD1Q9H0I2 346 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 DDX47Q9H0S4 455 aaKnown RBP13.77□□□□□ -0.21
CHD8-211ENST00000556833 PELI2Q9HAT8 420 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 PLAC1Q9HBJ0 212 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 PRM3Q9NNZ6 103 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 PRTFDC1Q9NRG1 225 aa13.77□□□□□ -0.21
CHD8-211ENST00000556833 URADA6NGE7 173 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 USP27XA6NNY8 438 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 NPIPA2E9PIF3 369 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 NPIPA3F8WFD2 350 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 WWP2O00308 870 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 DNALI1O14645 258 aaPredicted RBP13.76□□□□□ -0.21
CHD8-211ENST00000556833 ERI3O43414 337 aaKnown RBP13.76□□□□□ -0.21
CHD8-211ENST00000556833 OR2J2O76002 312 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 WDR47O94967 919 aa13.76□□□□□ -0.21
CHD8-211ENST00000556833 OR6B1O95007 311 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms