RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 JRKO75564 520 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 MYBL2P10244 700 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 ICAM2P13598 275 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 MTHFD2P13995 350 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 CASP2P42575 452 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 CCNG1P51959 295 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 RAP1GDS1P52306 607 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 EFNA3P52797 238 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 PLA2G16P53816 162 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 ACTN3Q08043 901 aaPredicted RBP13.3□□□□□ -0.28
SLIRP-207ENST00000556831 IFFO1Q0D2I5 559 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 DDX39BQ13838 428 aaKnown RBP13.3□□□□□ -0.28
SLIRP-207ENST00000556831 ABRAXAS2Q15018 415 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 PCBP2Q15366 365 aaKnown RBP eCLIP13.3□□□□□ -0.28
SLIRP-207ENST00000556831 LIPJQ5W064 366 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 TIFABQ6ZNK6 161 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 CHSY3Q70JA7 882 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 GOLGA7Q7Z5G4 137 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 ZADH2Q8N4Q0 377 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 OR2L5Q8NG80 312 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 OR5T3Q8NGG3 340 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 PPP4R1Q8TF05 950 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 THOC3Q96J01 351 aaKnown RBP13.3□□□□□ -0.28
SLIRP-207ENST00000556831 MAGEB10Q96LZ2 347 aaPredicted RBP13.3□□□□□ -0.28
SLIRP-207ENST00000556831 GPR78Q96P69 363 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 KCNC2Q96PR1 638 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 TUBB6Q9BUF5 446 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 IPPKQ9H8X2 491 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 ANKZF1Q9H8Y5 726 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 ZNF358Q9NW07 568 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 ASB1Q9Y576 335 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 PCDHGA11Q9Y5H2 935 aa13.3□□□□□ -0.28
SLIRP-207ENST00000556831 IGHV1-45A0A0A0MS14 117 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 LRIT2A6NDA9 550 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 SUV39H1O43463 412 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 B4GALT2O60909 372 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 WFS1O76024 890 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 CLDN9O95484 217 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 GSTA1P08263 222 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 COX6A1P12074 109 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 CASRP41180 1078 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 SLCO1A2P46721 670 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 MTTPP55157 894 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 GABPB1Q06547 395 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-207ENST00000556831 NSDHLQ15738 373 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 TMEM35AQ53FP2 167 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 TTC19Q6DKK2 380 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-207ENST00000556831 MS4A6EQ96DS6 147 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 CMTM7Q96FZ5 175 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 SERINC2Q96SA4 455 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 SMAD5Q99717 465 aaKnown RBP13.29□□□□□ -0.28
SLIRP-207ENST00000556831 NPLQ9BXD5 320 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-207ENST00000556831 KLHL31Q9H511 634 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 SLAMF7Q9NQ25 335 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 SCN3AQ9NY46 2000 aa13.29□□□□□ -0.28
SLIRP-207ENST00000556831 LRRK2Q5S007 2527 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 A0A0G2JN53 185 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 MAGEB17A8MXT2 336 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 GOLGA8RI6L899 631 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 CLDN4O14493 209 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 PRMT3O60678 531 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 CDH16O75309 829 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 GLRA3O75311 464 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 SIX3O95343 332 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-207ENST00000556831 B3GALT4O96024 378 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 SERPINA7P05543 415 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 PYGBP11216 843 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 EPORP19235 508 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 CD22P20273 847 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 GCAP28676 217 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 HNRNPH1P31943 449 aaKnown RBP13.28□□□□□ -0.28
SLIRP-207ENST00000556831 SSR2P43308 183 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 SOX8P57073 446 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 VSNL1P62760 191 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 HYAL2Q12891 473 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 AP5B1Q2VPB7 878 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 EMBQ6PCB8 327 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 TMEM205Q6UW68 189 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 RIPOR1Q6ZS17 1223 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 CPEB2Q7Z5Q1 589 aaKnown RBP13.28□□□□□ -0.28
SLIRP-207ENST00000556831 LAS2Q8IYD9 372 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 OR7G3Q8NG95 312 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 PTCHD1Q96NR3 888 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 LPAR4Q99677 370 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 IQCGQ9H095 443 aaKnown RBP13.28□□□□□ -0.28
SLIRP-207ENST00000556831 ILKAPQ9H0C8 392 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-207ENST00000556831 ZNF700Q9H0M5 742 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 NOL11Q9H8H0 719 aaKnown RBP13.28□□□□□ -0.28
SLIRP-207ENST00000556831 MLXIPLQ9NP71 852 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 MAP10Q9P2G4 905 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 DCDC2Q9UHG0 476 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 TEKT2Q9UIF3 430 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 ZNF490Q9ULM2 529 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-207ENST00000556831 NBPF19A0A087WUL8 3843 aa13.28□□□□□ -0.28
SLIRP-207ENST00000556831 LOC102723996A0A087X1L8 192 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 SYNDIG1LA6NDD5 238 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 E2F3O00716 465 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 SEC24DO94855 1032 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-207ENST00000556831 OTCP00480 354 aa13.27□□□□□ -0.29
SLIRP-207ENST00000556831 HSD17B3P37058 310 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms