RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 RWDD1Q9H446 243 aaPredicted RBP3.86□□□□□ -1.79
PRPF39-210ENST00000556718 C5orf66Q9H5L9 145 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 VIPAS39Q9H9C1 493 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 HOMER3Q9NSC5 361 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 PIGVQ9NUD9 493 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 PANK4Q9NVE7 773 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 TAS2R3Q9NYW6 316 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 SPASTQ9UBP0 616 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 FBXL4Q9UKA2 621 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 AURKCQ9UQB9 309 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 SELENOKQ9Y6D0 94 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 ERI2A8K979 691 aaKnown RBP3.85□□□□□ -1.79
PRPF39-210ENST00000556718 NDC80O14777 642 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 CPLX1O14810 134 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 SYT7O43581 403 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 CYTIPO60759 359 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 NOL3O60936 208 aaKnown RBP3.85□□□□□ -1.79
PRPF39-210ENST00000556718 PAK4O96013 591 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-210ENST00000556718 PGK2P07205 417 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 CHRNGP07510 517 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 FRMD6-AS1P0C7T7 363 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 ANPEPP15144 967 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 CTNNA2P26232 953 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 KIF5BP33176 963 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 MAGEA11P43364 429 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 RABIFP47224 123 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 NUMBP49757 651 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 TAF6P49848 677 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 CLCN4P51793 760 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 CNN1P51911 297 aaKnown RBP3.85□□□□□ -1.79
PRPF39-210ENST00000556718 CCZ1BP86790 482 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 CCZ1P86791 482 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-210ENST00000556718 GIT2Q14161 759 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 STX1AQ16623 288 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 WDR38Q5JTN6 314 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 TCEAL6Q6IPX3 200 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 TMEM207Q6UWW9 146 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 DLEU7Q6UYE1 221 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 RBMS3Q6XE24 437 aaKnown RBP3.85□□□□□ -1.79
PRPF39-210ENST00000556718 FAM43BQ6ZT52 329 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-210ENST00000556718 SLC16A9Q7RTY1 509 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 ADAMTSL2Q86TH1 951 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 HSCBQ8IWL3 235 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 STHQ8IWL8 128 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 ELMOD2Q8IZ81 293 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 ELMOD1Q8N336 334 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 OR52E1Q8NGJ3 308 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 FRAT1Q92837 279 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-210ENST00000556718 IL12RB2Q99665 862 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 NKX3-1Q99801 234 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-210ENST00000556718 SPAG8Q99932 426 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-210ENST00000556718 WWTR1Q9GZV5 400 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 RAB17Q9H0T7 212 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 ATG10Q9H0Y0 220 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 DCLRE1BQ9H816 532 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 POLE3Q9NRF9 147 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 ACOXLQ9NUZ1 547 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 INTS9Q9NV88 658 aaKnown RBP3.85□□□□□ -1.79
PRPF39-210ENST00000556718 POLKQ9UBT6 870 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 PILRBQ9UKJ0 227 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 DNPEPQ9ULA0 475 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 SATB2Q9UPW6 733 aa3.85□□□□□ -1.79
PRPF39-210ENST00000556718 MYH14Q7Z406 1995 aaKnown RBP3.84□□□□□ -1.79
PRPF39-210ENST00000556718 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 FAM172BPA6NC97 362 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 SNURFLB1AK76 121 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 EEF2KO00418 725 aaKnown RBP3.84□□□□□ -1.79
PRPF39-210ENST00000556718 OR6A2O95222 327 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 CXCL14O95715 111 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 GUCA1CO95843 209 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 TGFAP01135 160 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 MT-ND2P03891 347 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 SERPINB2P05120 415 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 SLC2A2P11168 524 aaPredicted RBP3.84□□□□□ -1.79
PRPF39-210ENST00000556718 KRT5P13647 590 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 EZRP15311 586 aaKnown RBP3.84□□□□□ -1.79
PRPF39-210ENST00000556718 CYP3A5P20815 502 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 AADACP22760 399 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 ACP1P24666 158 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 MARK3P27448 753 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 DCTP40126 519 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 CAMLGP49069 296 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 DCDC1P59894 354 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 KRTAP10-3P60369 221 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 CEACAM7Q14002 265 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 GK2Q14410 553 aaPredicted RBP3.84□□□□□ -1.79
PRPF39-210ENST00000556718 GRB14Q14449 540 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 CCDC6Q16204 474 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 FASTKD1Q53R41 847 aaKnown RBP3.84□□□□□ -1.79
PRPF39-210ENST00000556718 TAF1BQ53T94 588 aaPredicted RBP3.84□□□□□ -1.79
PRPF39-210ENST00000556718 C12orf60Q5U649 245 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 PRAMEF7Q5VXH5 474 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 SLC35E4Q6ICL7 350 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 SNRNP48Q6IEG0 339 aaKnown RBP3.84□□□□□ -1.79
PRPF39-210ENST00000556718 OR6B2Q6IFH4 312 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 WDR88Q6ZMY6 472 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 SH2D5Q6ZV89 423 aa3.84□□□□□ -1.79
PRPF39-210ENST00000556718 TRMT11Q7Z4G4 463 aaKnown RBP3.84□□□□□ -1.79
PRPF39-210ENST00000556718 TRPT1Q86TN4 253 aaKnown RBP3.84□□□□□ -1.79
PRPF39-210ENST00000556718 ARL6IP6Q8N6S5 226 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms