RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MAGEB18Q96M61 343 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 ZNF558Q96NG5 402 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 LGMNQ99538 433 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 DDX50Q9BQ39 737 aaKnown RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 PIMREGQ9BSJ6 248 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 IQCGQ9H095 443 aaKnown RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 GBA3Q9H227 469 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 OSGEPL1Q9H4B0 414 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 TRABDQ9H4I3 376 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 COQ10BQ9H8M1 238 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 ZNF304Q9HCX3 659 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.96□□□□□ -1.62
SRP54-211ENST00000556445 TMEM30AQ9NV96 361 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 DLL3Q9NYJ7 618 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 GDE1Q9NZC3 331 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 TXNDC16Q9P2K2 825 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 UXTQ9UBK9 157 aaPredicted RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 DNAJB11Q9UBS4 358 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 DNAJB4Q9UDY4 337 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 RSPH14Q9UHP6 348 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 USP22Q9UPT9 525 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 CHTOPQ9Y3Y2 248 aaKnown RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 MAD1L1Q9Y6D9 718 aa4.96□□□□□ -1.62
SRP54-211ENST00000556445 FNDC1Q4ZHG4 1894 aaPredicted RBP4.96□□□□□ -1.62
SRP54-211ENST00000556445 MYO18AQ92614 2054 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 ZNF638Q14966 1978 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 TCRBV7S3A2A0A539 114 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 TCRBV9S1A1TA0A576 114 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 AGAP5A6NIR3 686 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 MBD3L5A6NJ08 208 aaPredicted RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 FAM159BA6NKW6 160 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 KCNU1A8MYU2 1149 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 KDM4EB2RXH2 506 aaPredicted RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 E9PAM4 449 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 H0YIZ8 118 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 QSOX1O00391 747 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 RASAL1O95294 804 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 AP2A1O95782 977 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 LATS1O95835 1130 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 CYC1P08574 325 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 VIMP08670 466 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 NCF1P14598 390 aaPredicted RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 CCNB1P14635 433 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 CA4P22748 312 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 AHCYP23526 432 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 PSMB4P28070 264 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 SSTR1P30872 391 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 IDUAP35475 653 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 ATP5C1P36542 298 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 ETV1P50549 477 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 SNU13P55769 128 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 CCL23P55773 120 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 HNRNPH2P55795 449 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 ARPP19P56211 112 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 EFNB1P98172 346 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 CCDC15Q0P6D6 951 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 CDH17Q12864 832 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 PLD1Q13393 1074 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 GPM6BQ13491 265 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 LAMB3Q13751 1172 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 CBFBQ13951 182 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 HNRNPDQ14103 355 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 ITIH4Q14624 930 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 GPNMBQ14956 572 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 FASTKD3Q14CZ7 662 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 PSMD5Q16401 504 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 ZIK1Q3SY52 487 aaPredicted RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 MGAT5BQ3V5L5 792 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 C10orf120Q5SQS8 335 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 SPOUT1Q5T280 376 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 STXBP5Q5T5C0 1151 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 STEAP4Q687X5 459 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 RWDD4Q6NW29 188 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 CASC4Q6P4E1 433 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 FBXO46Q6PJ61 603 aaPredicted RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 SERPINA13PQ6UXR4 307 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 TIFABQ6ZNK6 161 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 CCDC121Q6ZUS5 278 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 CAMKMTQ7Z624 323 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 CTU1Q7Z7A3 348 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 TAF8Q7Z7C8 310 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 CAND1Q86VP6 1230 aaKnown RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 CTAGE3PQ8IX95 158 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 KLHDC8BQ8IXV7 354 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 UMODL1-AS1Q8N2C9 162 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 BBS5Q8N3I7 341 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 TMEM199Q8N511 208 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 GBP7Q8N8V2 638 aaPredicted RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 DNAAF3Q8N9W5 541 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 CCDC197Q8NCU1 140 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 LPCAT1Q8NF37 534 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 OR52K1Q8NGK4 314 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 DCAKDQ8WVC6 231 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 BCL2L2Q92843 193 aaPredicted RBP4.95□□□□□ -1.62
SRP54-211ENST00000556445 AZIN2Q96A70 460 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 ARRDC3Q96B67 414 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 PTERQ96BW5 349 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 ZBTB9Q96C00 473 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 REPS1Q96D71 796 aa4.95□□□□□ -1.62
SRP54-211ENST00000556445 IGSF21Q96ID5 467 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms