RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SRRM1Q8IYB3 904 aaKnown RBP21.15■□□□□ 0.98
ACTN1-220ENST00000556433 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.15■□□□□ 0.985e-8■■■■■ 204.6
ACTN1-220ENST00000556433 ZNF808Q8N4W9 903 aaPredicted RBP21.15■□□□□ 0.98
ACTN1-220ENST00000556433 TTLQ8NG68 377 aa21.15■□□□□ 0.98
ACTN1-220ENST00000556433 MAGED4Q96JG8 741 aa21.15■□□□□ 0.98
ACTN1-220ENST00000556433 FRMD6Q96NE9 622 aa21.15■□□□□ 0.98
ACTN1-220ENST00000556433 CAPS2Q9BXY5 557 aa21.15■□□□□ 0.98
ACTN1-220ENST00000556433 DEFB126Q9BYW3 111 aa21.15■□□□□ 0.98
ACTN1-220ENST00000556433 DERL2Q9GZP9 239 aa21.15■□□□□ 0.98
ACTN1-220ENST00000556433 CAB39LQ9H9S4 337 aa21.15■□□□□ 0.98
ACTN1-220ENST00000556433 KLF2Q9Y5W3 355 aaPredicted RBP21.15■□□□□ 0.98
ACTN1-220ENST00000556433 A0A0G2JN53 185 aa21.14■□□□□ 0.97
ACTN1-220ENST00000556433 SLC25A12O75746 678 aa21.14■□□□□ 0.97
ACTN1-220ENST00000556433 ESRRAP11474 423 aaPredicted RBP21.14■□□□□ 0.97
ACTN1-220ENST00000556433 GRNP28799 593 aaKnown RBP21.14■□□□□ 0.97
ACTN1-220ENST00000556433 SSTR1P30872 391 aa21.14■□□□□ 0.97
ACTN1-220ENST00000556433 CYB561P49447 251 aa21.14■□□□□ 0.97
ACTN1-220ENST00000556433 ILF2Q12905 390 aaKnown RBP21.14■□□□□ 0.97
ACTN1-220ENST00000556433 TGFBIQ15582 683 aa21.14■□□□□ 0.97
ACTN1-220ENST00000556433 RPTNQ6XPR3 784 aa21.14■□□□□ 0.97
ACTN1-220ENST00000556433 KRT78Q8N1N4 520 aa21.14■□□□□ 0.97
ACTN1-220ENST00000556433 GAL3ST3Q96A11 431 aa21.14■□□□□ 0.97
ACTN1-220ENST00000556433 NT5DC2Q9H857 520 aa21.14■□□□□ 0.97
ACTN1-220ENST00000556433 SAYSD1Q9NPB0 183 aa21.14■□□□□ 0.97
ACTN1-220ENST00000556433 MMACHCQ9Y4U1 282 aa21.14■□□□□ 0.97
ACTN1-220ENST00000556433 LRIT2A6NDA9 550 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 ENO4A6NNW6 628 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 CXorf49A8MYA2 514 aaPredicted RBP21.13■□□□□ 0.97
ACTN1-220ENST00000556433 ERI3O43414 337 aaKnown RBP21.13■□□□□ 0.97
ACTN1-220ENST00000556433 CCDC166P0CW27 439 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 PRF1P14222 555 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 HNRNPH1P31943 449 aaKnown RBP21.13■□□□□ 0.97
ACTN1-220ENST00000556433 GPSM1Q86YR5 675 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 SPPL2CQ8IUH8 684 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 TCAIMQ8N3R3 496 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 CDKL2Q92772 493 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 MS4A6EQ96DS6 147 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 TSPAN17Q96FV3 270 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 NPLQ9BXD5 320 aaPredicted RBP21.13■□□□□ 0.97
ACTN1-220ENST00000556433 DPH5Q9H2P9 285 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 RUBCNLQ9H714 662 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 PNO1Q9NRX1 252 aaKnown RBP21.13■□□□□ 0.97
ACTN1-220ENST00000556433 WWOXQ9NZC7 414 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 GPRC5BQ9NZH0 403 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 TXNDC16Q9P2K2 825 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 TINAGQ9UJW2 476 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 ZNF835Q9Y2P0 537 aa21.13■□□□□ 0.97
ACTN1-220ENST00000556433 FCHO1O14526 889 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 TAPBPO15533 448 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 PHGDHO43175 533 aaKnown RBP21.12■□□□□ 0.97
ACTN1-220ENST00000556433 ASNA1O43681 348 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 NME2P1O60361 137 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 WISP3O95389 354 aaPredicted RBP21.12■□□□□ 0.97
ACTN1-220ENST00000556433 NME2P22392 152 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 TRHRP34981 398 aaPredicted RBP21.12■□□□□ 0.97
ACTN1-220ENST00000556433 HLCSP50747 726 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 CALCOCO2Q13137 446 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 NAA30Q147X3 362 aaPredicted RBP21.12■□□□□ 0.97
ACTN1-220ENST00000556433 SIAH3Q8IW03 269 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 B3GNT7Q8NFL0 401 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 TMEM125Q96AQ2 219 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 PDLIM2Q96JY6 352 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 ERP44Q9BS26 406 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 TMEM79Q9BSE2 394 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 TRIM45Q9H8W5 580 aaPredicted RBP21.12■□□□□ 0.97
ACTN1-220ENST00000556433 CNOT10Q9H9A5 744 aaKnown RBP21.12■□□□□ 0.97
ACTN1-220ENST00000556433 PRTFDC1Q9NRG1 225 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 DNAJC11Q9NVH1 559 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 WHRNQ9P202 907 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 PYCARDQ9ULZ3 195 aa21.12■□□□□ 0.97
ACTN1-220ENST00000556433 PCNX1Q96RV3 2341 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 TRBV11-1A0A0K0K1C0 115 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 FAM187AA6NFU0 413 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 ANKDD1BA6NHY2 528 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 CLDN4O14493 209 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 CLGNO14967 610 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 B3GALT2O43825 422 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 CLEC3AO75596 197 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 MYO1DO94832 1006 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 GSTM2P28161 218 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 HTR1EP28566 365 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 GGT5P36269 586 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 HSPA7P48741 367 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 CLCN2P51788 898 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 PLA2G16P53816 162 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 FBXO48Q5FWF7 155 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 SULT1C3Q6IMI6 304 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 XKRXQ6PP77 449 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 BNC2Q6ZN30 1099 aaPredicted RBP21.11■□□□□ 0.97
ACTN1-220ENST00000556433 ZNF227Q86WZ6 799 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 CPSF7Q8N684 471 aaKnown RBP21.11■□□□□ 0.97
ACTN1-220ENST00000556433 SNX31Q8N9S9 440 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 ESAMQ96AP7 390 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 SEC16BQ96JE7 1060 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 PITHD1Q9GZP4 211 aaPredicted RBP21.11■□□□□ 0.97
ACTN1-220ENST00000556433 FBXW2Q9UKT8 454 aa21.11■□□□□ 0.97
ACTN1-220ENST00000556433 A0A088AWK7 358 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 FANCGO15287 622 aa21.1■□□□□ 0.97
ACTN1-220ENST00000556433 EIF3HO15372 352 aaKnown RBP eCLIP21.1■□□□□ 0.97
ACTN1-220ENST00000556433 STK16O75716 305 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms