RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 PRDM9Q9NQV7 894 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 ZNF223Q9UK11 482 aaPredicted RBP12.42□□□□□ -0.42
TGFB3-204ENST00000556285 CORO1CQ9ULV4 474 aaPredicted RBP12.42□□□□□ -0.42
TGFB3-204ENST00000556285 ZNF469Q96JG9 3925 aaPredicted RBP12.42□□□□□ -0.42
TGFB3-204ENST00000556285 TRBV11-1A0A0K0K1C0 115 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 MYOCOSA0A1B0GUC4 107 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 FAM95CA0A1B0GW59 222 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 ADAM10O14672 748 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 RNH1P13489 461 aaKnown RBP12.41□□□□□ -0.42
TGFB3-204ENST00000556285 HNRNPH1P31943 449 aaKnown RBP12.41□□□□□ -0.42
TGFB3-204ENST00000556285 CYB561P49447 251 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 HLCSP50747 726 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 MORF4L2Q15014 288 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 FBXO48Q5FWF7 155 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 ADNP2Q6IQ32 1131 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 C16orf47Q6ZP98 133 aaPredicted RBP12.41□□□□□ -0.42
TGFB3-204ENST00000556285 SLCO4C1Q6ZQN7 724 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 DOLPP1Q86YN1 238 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.41□□□□□ -0.42
TGFB3-204ENST00000556285 SPATA6LQ8N4H0 392 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 HORMAD2Q8N7B1 307 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 APCDD1LQ8NCL9 501 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 TRPV3Q8NET8 790 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 AGAP11Q8TF27 550 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 SREK1Q8WXA9 508 aaKnown RBP12.41□□□□□ -0.42
TGFB3-204ENST00000556285 PDLIM2Q96JY6 352 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 TRIM31Q9BZY9 425 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 KCNF1Q9H3M0 494 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 TRIM45Q9H8W5 580 aaPredicted RBP12.41□□□□□ -0.42
TGFB3-204ENST00000556285 CHST11Q9NPF2 352 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 SMYD2Q9NRG4 433 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 ASB1Q9Y576 335 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 CLDN16Q9Y5I7 305 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 HRH3Q9Y5N1 445 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 ZFHX3Q15911 3703 aa12.41□□□□□ -0.42
TGFB3-204ENST00000556285 USP27XA6NNY8 438 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 PRKNO60260 465 aaPredicted RBP12.4□□□□□ -0.42
TGFB3-204ENST00000556285 PRAMEF4O60810 478 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 WDR47O94967 919 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 TBX6O95947 436 aaPredicted RBP12.4□□□□□ -0.42
TGFB3-204ENST00000556285 SERPINA6P08185 405 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 C1GALT1C1LP0DN25 315 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 ABOP16442 354 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 ZNF24P17028 368 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 TRHRP34981 398 aaPredicted RBP12.4□□□□□ -0.42
TGFB3-204ENST00000556285 PTGER4P35408 488 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 MEOX1P50221 254 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 SMSP52788 366 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 SKP1P63208 163 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 MRPS25P82663 173 aaKnown RBP12.4□□□□□ -0.42
TGFB3-204ENST00000556285 MGAT5Q09328 741 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 PRAMEF9Q5VWM5 478 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 NIPAL1Q6NVV3 410 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 GDF7Q7Z4P5 450 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 VN1R5Q7Z5H4 357 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 SULF2Q8IWU5 870 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 ARMC10Q8N2F6 343 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 GHDCQ8N2G8 530 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 MTFMTQ96DP5 389 aaKnown RBP12.4□□□□□ -0.42
TGFB3-204ENST00000556285 EGFL8Q99944 293 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 DEFB126Q9BYW3 111 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 RUBCNLQ9H714 662 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 LIN28AQ9H9Z2 209 aaKnown RBP12.4□□□□□ -0.42
TGFB3-204ENST00000556285 PNO1Q9NRX1 252 aaKnown RBP12.4□□□□□ -0.42
TGFB3-204ENST00000556285 MOCS1Q9NZB8 636 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 ITGB1BP2Q9UKP3 347 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 OARD1Q9Y530 152 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 KCNE2Q9Y6J6 123 aa12.4□□□□□ -0.42
TGFB3-204ENST00000556285 C2CD3Q4AC94 2353 aa12.4□□□□□ -0.43
TGFB3-204ENST00000556285 LRIT2A6NDA9 550 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 NCF1BA6NI72 391 aaPredicted RBP12.39□□□□□ -0.43
TGFB3-204ENST00000556285 NCF1CA8MVU1 366 aaPredicted RBP12.39□□□□□ -0.43
TGFB3-204ENST00000556285 PSMD12O00232 456 aaPredicted RBP12.39□□□□□ -0.43
TGFB3-204ENST00000556285 TAPBPO15533 448 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 MYO1DO94832 1006 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 SEC31AO94979 1220 aaKnown RBP12.39□□□□□ -0.43
TGFB3-204ENST00000556285 CLDN14O95500 239 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 MLYCDO95822 493 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 NCF1P14598 390 aaPredicted RBP12.39□□□□□ -0.43
TGFB3-204ENST00000556285 AGAP20933 346 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 GMPRP36959 345 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 SLC6A12P48065 614 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 GPR143P51810 404 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 ARL4CP56559 192 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 GPR85P60893 370 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 CDKL1Q00532 357 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 DR1Q01658 176 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 PDIA2Q13087 525 aaKnown RBP12.39□□□□□ -0.43
TGFB3-204ENST00000556285 FRG1Q14331 258 aaKnown RBP12.39□□□□□ -0.43
TGFB3-204ENST00000556285 SLBPQ14493 270 aaKnown RBP eCLIP12.39□□□□□ -0.43
TGFB3-204ENST00000556285 CAPN12Q6ZSI9 719 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 MDGA2Q7Z553 956 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 CLNKQ7Z7G1 428 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 CREG2Q8IUH2 290 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 SCUBE1Q8IWY4 988 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 NKAPQ8N5F7 415 aaKnown RBP12.39□□□□□ -0.43
TGFB3-204ENST00000556285 FAM47BQ8NA70 645 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 FAM98AQ8NCA5 519 aaKnown RBP12.39□□□□□ -0.43
TGFB3-204ENST00000556285 FBXO36Q8NEA4 188 aa12.39□□□□□ -0.43
TGFB3-204ENST00000556285 B3GNT7Q8NFL0 401 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms